Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00387 ATGAGAGGCAAAGGAGCGATTGTTCCACCTTCTCATTCTCGCGGTGGTGGAAAATTGCAGCAAATTGAGAAAACTGTTGTTTTGTCAAATTCGAGATACGATGATATAGTAGTTAACGGAAACGGTAAGAAAAGGCGAAAACGGAATAACTGTCTTCAGGAGTTGTTAACAACAGGTTATATTGTAAACAACGTGTTGTTGAATGATGGTCCTCCTCTTGGACGGGAATTTGATTCTCTTCCTTCAGGACCCAAAAATTACACTTCTGCTGGTCATCAGGACCAAGAGCCTGTCAAAAGGAGGAAGGCTTCCAAGAGTGCAATTCAAAGTCACCCTAGTTGTAATATGAAAGCACCTGTTAAGAAACATGGTATGGGCAAAGGTCTGATGACAGTTTGGAGGGCAACGAATCCTGATGCTAGAGACCTTCCAAACGGTTTTGGTATTGCTGACCGGGAAGTTCATCCAATCTCTAATTCTAAAACATCTATACCGGTCAGCAGGTCACAGAAAGCTGTAACCATGAATGGAATGCCAAGAAATAAAATGCAGAATAGGAAAACTAAATTACAGGAGAAGAGGAAACATTTAGCGCAAAAAAGAATGGGTGAAACAAATCTATGTGTTTCTCAGAACCAACCACCCATAGAAAAATGTGAACTTGCTTCGGTTAGCTCAATATCTGAGGAGGGAGTTGATCAAATTTCAATGTTAGTTGACGATGAAGAATTAGAGCTGAGAGAGTTACAAGAAAGAACCAATCTGCTTATTTATTCAGATCAACTTGCTGTCAGTGGAATGCTTGGTGGCACACTTTGTCCAGATGTGTTAGTCAAGTTCCCTCCAGGTACTGTCAAGATGAAGAAACCTATACATTTGCAACCTTGGGACTCTTCCCCAGAACTGGTGAAGAAATTATTTAAGGTTTTCCATTTCATTTATACATATGCTGTAGTTGTTGACGTTTGTCCCTTCACTCTTGATGAATTTGTTCAGGCATTTCATGATAAGGATTCGATGTTACTTGGAAAGATTCACGTGGCCCTTCTCACGCTGCTTCTATCTGACATTGACGTGGAGCTTTCTAATGGGTTTTGTCCTCATTTAAACAAGTCAAGTAACTTTCTTGCATTGCTTCACTCGGTTGAAAGTCAAGAATATTTCCTGGACGTTTGGAGAAGATCTCTAAACCCTTTTACTTGGATTGAAATACTCCGTCAAGTTCTAGTAGCTGCTGGATATGGTTCGAAGCCTGGTGCCTTACAAAGAGAGGTTCTTGGCAAGGAGTTGAATATTCTTGTGAACTATGGCCTGTGCCCTGGCACCTTGAAGGGTGAGTTGTTTAAAATCTTGTCTGAACGAGGTAACAATGGATGCAAAGTTTCTGAGCTGGCAAAGTCAATGCAGATTGCGGAATTAAACCTTGCCAAGACAACGGAGGAACTGGAGTCTTTAATATATTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCGTCGCGTGCATATCGATTGCGTATGAGCACTGTTATAAAGGACAGTGATGATTTTCAGTCAGATACAGAGGACTCTGGGAGTGTTGATGATGAGCTTAATGCCTCTGATACATGTAGCAGTGGTGATGATTTTGAAAGTGATTCCATAATCTCAAATATAAGAAAGTTGAAGCGTGCTAACAGTCGGAAAATTAAAAATAATTTCCTGAAAGTTCACACTGAAATTGATGAGAGCCATGCAGGAGAAGTGTGGTTGTTAGGACTGATGGATAGTGAATATTCAGATTTGAAAATTGAAGAAAAATTGAGTGCATTGGCAGCTCTAACCGGTCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAGTAAAAGTTACAGCTGATTGTAATTCTAGCATCCAGTTACGTGGTTCTGGAGCAAAAATTAAGCGATCAGTAGTGCAGAAGCCTGGTTCATTTGTGAACCCAATTGAGCAAATGCAATCTGTTAAGGTGGTGCCCTTGAATTCTCATCCCTGTCCAGTAGATTCTTCATTGCTAGTCTCAAAATTCAATATTCAGAAGGCATCCAATGAGAAAGGAAAAGGATCAGGTTGTTCACACCCCATACAATCAGTGTTTTTGGGATCTGATCGCCGATATAATAGATACTGGCTTTTCTTGGGCCCTTGTAATGCGGATGATCCTGGCCACAGGAGGGTGTACTTTGAATCCTCTGAAGATGGTCACTGGGAGGTGATTGATACAGAAGAGGCATTGTGTGCCTTGTTGTCAGTTCTGGATGATAGAGGGAAACGTGAGGCTCTTCTTATTGAATCTTTAGAGAGACGACAAACATCTTTATGCAGATCTATGTCCAGGATTAAGGTTAACAATATTCGAATGAAGTGTATGTCACATTTTGATCAGTCTGAGCTGGATAGGGTTACAGAAGACAGCTGTTCTCCAGTATCCGATATAGATAACCTGAACCTGATTGAGACTGCTAGAGACTCTTCGTCTTCAGCTGGGGCTGTGGTAATTGAAGCTGGAAAGAAAGCAGAGGAACAACTGCAAAAATGGATCCGTGTTCAAGAATATGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGAAAAAGGTCTTATCTTGACTCTCTCGCTAGATGTAGGAGTTGCCATGATCTATACTGGAGAGATGAGAAACACTGTAAAATTTGCCATATGACATTTGAGCTTGATTTTGACCTTGAAGAAAGATATGCAATCCACCTAGCCATGTGCAGGGAGAAAGAAGACAATGGCACATTTCCAAATCATAAGGTCTTGTCATCACAGATTCAATCACTGAAAGCTGCAATTTATGCAATTGAGTCTGTTATGCCTGAAGACTCCCTTGTTGGTGCTTGGAGGAAGTCTGCTCACACTCTATGGATCAAAAGGCTCAGGCGCACCTCAACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATGAGGACTGGTTGTGTCGGTGCAAATTTCCAGACGGTGTGGTTGAAGAGACCGTTGCATCTTTTGCATCAATGCCTCATACTTCATCTGCTCTTGCTCTATGGTTGGTGAAGTTAGATGCCATAATTGCTCCTTACCTGGAAAGAGTCCAAACACAAAAGAAATAG 3177 0.4095 MRGKGAIVPPSHSRGGGKLQQIEKTVVLSNSRYDDIVVNGNGKKRRKRNNCLQELLTTGYIVNNVLLNDGPPLGREFDSLPSGPKNYTSAGHQDQEPVKRRKASKSAIQSHPSCNMKAPVKKHGMGKGLMTVWRATNPDARDLPNGFGIADREVHPISNSKTSIPVSRSQKAVTMNGMPRNKMQNRKTKLQEKRKHLAQKRMGETNLCVSQNQPPIEKCELASVSSISEEGVDQISMLVDDEELELRELQERTNLLIYSDQLAVSGMLGGTLCPDVLVKFPPGTVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIDVELSNGFCPHLNKSSNFLALLHSVESQEYFLDVWRRSLNPFTWIEILRQVLVAAGYGSKPGALQREVLGKELNILVNYGLCPGTLKGELFKILSERGNNGCKVSELAKSMQIAELNLAKTTEELESLIYSTLSSDITLFEKISSRAYRLRMSTVIKDSDDFQSDTEDSGSVDDELNASDTCSSGDDFESDSIISNIRKLKRANSRKIKNNFLKVHTEIDESHAGEVWLLGLMDSEYSDLKIEEKLSALAALTGLLSSGSSIRMKDPVKVTADCNSSIQLRGSGAKIKRSVVQKPGSFVNPIEQMQSVKVVPLNSHPCPVDSSLLVSKFNIQKASNEKGKGSGCSHPIQSVFLGSDRRYNRYWLFLGPCNADDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSRIKVNNIRMKCMSHFDQSELDRVTEDSCSPVSDIDNLNLIETARDSSSSAGAVVIEAGKKAEEQLQKWIRVQEYDSWIWNSFYLDLNVVKYGKRSYLDSLARCRSCHDLYWRDEKHCKICHMTFELDFDLEERYAIHLAMCREKEDNGTFPNHKVLSSQIQSLKAAIYAIESVMPEDSLVGAWRKSAHTLWIKRLRRTSTLVELLQVLADFVGAINEDWLCRCKFPDGVVEETVASFASMPHTSSALALWLVKLDAIIAPYLERVQTQKK 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00387 1058 MobiDBLite consensus disorder prediction 1 20 - -
Car06g00387 1058 ProSiteProfiles DDT domain profile. 300 359 IPR018501 -
Car06g00387 1058 MobiDBLite consensus disorder prediction 517 540 - -
Car06g00387 1058 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 41 1057 IPR044977 GO:0006357
Car06g00387 1058 Pfam DDT domain 301 356 IPR018501 -
Car06g00387 1058 MobiDBLite consensus disorder prediction 73 122 - -
Car06g00387 1058 Coils Coil 461 481 - -
Car06g00387 1058 SMART testlast3 300 359 IPR018501 -
Car06g00387 1058 Coils Coil 232 252 - -
Car06g00387 1058 Coils Coil 180 200 - -
Car06g00387 1058 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 580 620 IPR028942 -
Car06g00387 1058 PANTHER OS07G0619600 PROTEIN 41 1057 - -
Car06g00387 1058 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 706 779 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00387 Car-Chr6 4019882 4029204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00387 220 1046 Homeobox Transcription Factor Family AT1G28420 26.633 2.31e-71 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Car06g00387 WSD 2.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00387 - - aprc:113853612 1585.85