Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00374 ATGAGTAGCCAAAAGGGTCATTATCATTATGAAGAAGAAATGATGGGTTCTTGCTCTAAGGTGAATGGTGGTGGTAAAGTTGTTGTAGTTGCAGTGAAAGCTTCTAAAGATATTTCAAAGAATGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTTTTGGTCATCATTCCTGCACTTTCCTCAAGGAAGAAGGTATGGGGTATTTCAAGATTTACTACTGATTGTGCCACTAGTCATTGGACATCGCGTTTAGGAACTGTTTCGGATCAGAAAGAAGTTATTACAAATTCATGTTCTCAATTAGTGCTTCAACTTCATGATTTTTATGATCCAGAGAAGATAAAGATCAGAGTAAAGATTCTTTCTGGTTCGTTATGTGGTTCGGTGGCTGCAGAAGCGAAGAGAGTGCAGTCAAGCTGGGTTATATTGGACAGAAAATTGAAAAGTGAAAAGAAATTCTGCATGGAAGGGCTGCATTGCAATATTGTAATTATGAAGCAGTCTCACGCGAAGATTCTACGCTTGAATTTGAATAGTTCACCTAAGACGGAACTGAGTAGAGATTGTACATTGTCATCAGAGCCAAATGCATACACAAGAAACTTAAAAGACAATTCTGAAGATCCAGGTATAACTAGAGGTCCAGCAGTTACTCCTGCTAGTAGTCCAGATCAAGGGTCACCACCATTGACTGTAACTGACATTGGAACAGCTTCTATATCGAGCTCAGATCCAGGGACTTCGCCATTTTTCCACTCTGATAATTATGAAAGGAGAAGGAGATGTTTTCCCTTTGTTATTCATGAGGGATTGACAAACTTGGAGGATATTGACTCTGACTCAGAGAGTGAAAAGCTAAGTTCATCGTCCAAAAGTTCGTCTTTTCAGCCGTGGATTGCAAATGTAATTTGTGTAGATGGCGAATTCTCAAAACAAGATGAGGACAATATGCAAAGATCTAATGATAAGGCTTTGGTTTCTACCTATGAAGCTTTGCTTCAGAAATTCACAATGTTGGATCGAGACCCTATCTTCGGAGTGCCTACTTGTAAAATCGATGTGAACTTAAGCAAAAGTGTTAGAGAAGCGATTTCTCTAGCTAGAAGTGCACCTCACGGACCTCCCCCATTGTGCTCTATTTGTCAGCACAAAGCACCAGCATTTGGGAATCCTCCAAGGTGGTTTACATTTGCCGAATTACAACTTGCCACGGGTGGTTTTTCGCAAGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCGGTACACCGCGGTGTCCTACCTGACGGGCAAGTCATCGCTGTCAAGCAGTATAAATTAGCTAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTTGAGGTCTTAAGCTGCGCACAACACCGCAATGTTGTGATGTTAATTGGGTTCTGTGTGGAAGAGGGAAGAAGATTGCTAGTTTATGAGTATATCTGTAATGGATCGCTTGATTCTCATCTCTACGGACGAATGCAGAACGTGCTGGATTGGTCTGCACGCCAAAAAATTGCGGTTGGAGCAGCTCGTGGTTTAAGATATCTTCATGAAGAATGTAGAGTTGGTTGCATTGTACACCGTGATTTGCGGCCTAACAACATCCTTCTCACTCATGATTTCGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGATATGGGTGTGGAAACAAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAGTATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGACGTGTACTCATTTGGGATCGTATTACTTGAGCTTGTGACTGGTCGGAAAGCCGTGGATATTGACCGGCCCAGGGGCCAGCAATGTCTTAGTGAATGGGCACGTCCATTGCTTGAAGAACACGCCATTCATAAACTTGTCGATCCGAGCATAGGAAACCGCTATGTTGATGAAGAGGTTTATCGCATGATGCAATGTTCCTCTCTGTGTATCAGACGCGATCCTCATTTAAGGCCTCGAGTGTCTCAGGTGCTCAAGATGCTGGAAGGTGACATTCTCATGTGA 2073 0.426 MSSQKGHYHYEEEMMGSCSKVNGGGKVVVVAVKASKDISKNALVWALTHVVQPGDCIKLLVIIPALSSRKKVWGISRFTTDCATSHWTSRLGTVSDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGSVAAEAKRVQSSWVILDRKLKSEKKFCMEGLHCNIVIMKQSHAKILRLNLNSSPKTELSRDCTLSSEPNAYTRNLKDNSEDPGITRGPAVTPASSPDQGSPPLTVTDIGTASISSSDPGTSPFFHSDNYERRRRCFPFVIHEGLTNLEDIDSDSESEKLSSSSKSSSFQPWIANVICVDGEFSKQDEDNMQRSNDKALVSTYEALLQKFTMLDRDPIFGVPTCKIDVNLSKSVREAISLARSAPHGPPPLCSICQHKAPAFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEEGRRLLVYEYICNGSLDSHLYGRMQNVLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDIDRPRGQQCLSEWARPLLEEHAIHKLVDPSIGNRYVDEEVYRMMQCSSLCIRRDPHLRPRVSQVLKMLEGDILM 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00374 690 MobiDBLite consensus disorder prediction 189 258 - -
Car06g00374 690 SMART tyrkin_6 414 684 IPR020635 GO:0004713|GO:0006468
Car06g00374 690 Gene3D Phosphorylase Kinase; domain 1 386 489 - -
Car06g00374 690 Pfam Protein tyrosine and serine/threonine kinase 418 684 IPR001245 GO:0004672|GO:0006468
Car06g00374 690 CDD STKc_IRAK 420 686 - -
Car06g00374 690 Gene3D Transferase(Phosphotransferase) domain 1 490 688 - -
Car06g00374 690 PANTHER OS01G0253100 PROTEIN 23 690 IPR045271 GO:0004714|GO:0006468
Car06g00374 690 ProSiteProfiles Protein kinase domain profile. 414 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00374 690 MobiDBLite consensus disorder prediction 189 212 - -
Car06g00374 690 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 23 690 - -
Car06g00374 690 MobiDBLite consensus disorder prediction 225 257 - -
Car06g00374 690 SUPERFAMILY Protein kinase-like (PK-like) 395 685 IPR011009 -
Car06g00374 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 535 547 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00374 Car-Chr6 3893745 3899523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00374 376 680 Trihelix Transcription Factor Family AT1G68690 51.935 4.30e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car06g00374 PK_Tyr_Ser-Thr 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00374 - - aprc:113855006 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00374 06 3893745 3899523 Car06g00374 06 3893745 3899523 ECH