Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00362 ATGGGGACCAATGATGTCCGGGTGGATGTCAAGTTGAACAAGTCTGTGTGGAGCCAGGGAATCCGAAGTGTCCCCAGAAGAATCCGGATACGCATTGCGCGCAAGAGAAACGATGATGAGGACGCCAAGGAAGAGCTCTACTCCCTTGTTACCGTTGTTGAGATCCCTAGGGAAGAGCTCAAAGAACAAGAAGAGTTGGTTCGTTCTTTAGAAAGAAGTCAAGCTCAACAGAGTCGATTATGGAGGAATGTATTTGCGGCTCTAGTCTCTTGTTACATCCTGTTTCTTTTGTACTCCATCTTCCACCAGGCTTCATCTCCATGGGAACTGCGGTATCATGCTTACTTCATGGAGGAAATCTACTCATGGATGATTATATCTGCAGATTTGGTGGCTGTTTTAGCATGCTCATTTGCTATCATAGGACTGCTTCATGAGTCAATGCATCACAGGATATGGATCCAGTACTCATGTTATACCGGCATTGTTCTGGCAATTTTCTGGTTATATTACATGTCGAGGTTGCCTAGGTTTCGTTGGGATGTTATATGGCTTCCATTTGGTCCTCTTAGTGCATCCTCAATCTGTCTCTATGTGGATCACTTACTAACTGAATCATCAGAAGAGGAAGCCAATGCTCTAACAACTTTAGACAAGTTAAACGAGACACTTGAAATGCTAGAGAAAAAGGAGAAAGTGCTCCTTAAAAAGAGTGCAGCAGAAGTTGAAAAAGCCAAAGAATTCACAAGGGCAAAGAATAAAAGGGCGGCAATACAGTGTTTGAAGAGGAAGAGGCTATATGAACAGCAAATAGAGCAACTTGGAAACTTCCAGTTGCGTATACATGACCAGATGATAATGTTGGAAGGAGCCAAGGCAACTACAGACACGGTCGATGCTTTGAGAACTGGAGCATCTGCAATGAAGGCTATGCAAAAAGCAACGAATATTGATGATGTTGACAAGACCATGGACGAGATCAATGAACAAACAGAGAACATGAAACAGATTCAGGAAGCATTGTCAGCTCCAATTGGTGCAGCTGCTGACTTTGATGAGGATGAATTGGAAGCAGAACTTGAAGAGCTAGAGGGTGCCGAGTTGGAAGAACAGCTTCTTCAGCCTGCAACTACAACTCCAGAATCCCCAATGCATGTCCCAGCTGGGCGGCAACCTACCCGCCCTGTGTCTGTGAAACCCACTGCTGAGGAGGATGAATTGGCAGCTTTGCAGGCTGAGATGGCACTTTGA 1251 0.4492 MGTNDVRVDVKLNKSVWSQGIRSVPRRIRIRIARKRNDDEDAKEELYSLVTVVEIPREELKEQEELVRSLERSQAQQSRLWRNVFAALVSCYILFLLYSIFHQASSPWELRYHAYFMEEIYSWMIISADLVAVLACSFAIIGLLHESMHHRIWIQYSCYTGIVLAIFWLYYMSRLPRFRWDVIWLPFGPLSASSICLYVDHLLTESSEEEANALTTLDKLNETLEMLEKKEKVLLKKSAAEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTDTVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATTTPESPMHVPAGRQPTRPVSVKPTAEEDELAALQAEMAL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00362 416 Coils Coil 349 373 - -
Car06g00362 416 Pfam Ribosomal protein L31e 1 44 IPR000054 GO:0003735|GO:0005840|GO:0006412
Car06g00362 416 Pfam Snf7 218 384 IPR005024 GO:0007034
Car06g00362 416 Gene3D - 1 68 IPR023621 -
Car06g00362 416 MobiDBLite consensus disorder prediction 375 404 - -
Car06g00362 416 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1 207 416 - -
Car06g00362 416 Gene3D - 211 289 - -
Car06g00362 416 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 207 416 IPR005024 GO:0007034
Car06g00362 416 Coils Coil 60 80 - -
Car06g00362 416 Coils Coil 210 237 - -
Car06g00362 416 SUPERFAMILY Ribosomal protein L31e 1 44 IPR023621 -
Car06g00362 416 SMART Ribosomal_L31e_2 1 45 IPR000054 GO:0003735|GO:0005840|GO:0006412
Car06g00362 416 Coils Coil 320 340 - -
Car06g00362 416 Gene3D - 315 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00362 Car-Chr6 3794048 3804941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00362 1 60 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 78.333 2.42e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00362 K12194 - mtr:MTR_8g101990 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00362 06 3794048 3804941 Car06g00362 06 3794048 3804941 ECH