Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00353 ATGATGAATAAGATGAGCAACGTAACTTGCTCTGATCTAATAGATGCAAAGCTTGAAGAACATCAATTGTGTGGATCCAAACAGTGCCCTGGTTGTGGACACAAGTTTGATCAAGGTGGCAAGCCGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAACTCATTGAACATCTTGAAGCCAAAGTTGAGTCCAAAAATAATATCAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGTATTTGTTACACCCATCCTGAAAAACTCCCAGGTGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACAAGAAAAAGGAGAAAAATTCAAACAGAAGAATGTGACATACAAGGAAATACAGGAGGAGAAACAAGATGGCACAAAACTGGTAAAACAAGACCTGTTATGGTGAATGGAAAACAAAAAGGTTGTAAGAAAATTCTAGTCCTCTACACTAATTTCGGGAAGAATCGAAAACCTGAAAAGACGAACTGGGTGATGCATCAATACCATTTAGGACAACATGAAGAGGAAAAAGAAGGTGAACTTGTTGTGTCAAAGATATTCTATCAGACTCAACCAAGACAGTGTAATTGGTCTGATCATAAAAGTGTTACAAATATTAATGGTGAAGCaattgaaggtagaagagatagtggaagtggaagtTGTTCTAATTCTTCTAAGGAAATTGTTCATCACATTAATCATAATCATAGAGATGAAATGTCTGCTGTTCCAACTCCTTTAACAAATTTCACTTCTTCCTTGGATATTCAACACCTTAAAAATGATCATTTTGGATTCATTCCTTTTCGAAAAAGCTTCGATGAGGTTGGAATAGGAGAAAGTTGTAGAGGAAGAGAAATTCAACAAGCATCAGGAAGATGTGATGAACATGAACATGAGCAGATTAATGCAACCACATCTTTCCATATGAGTAGGCCTTCCAATCCAATCTCAACTATCATATCTCCACCACCTCTCCACCACACTTCCATCATTCTTGATGACAATTCTTACCATGTCTCAACAATAATGCTCCAAAATGATCATTTCCAGcagcagcagcagcagcaTAAAATAGGTGGAAGTGGAAGGTCTGCTTCTTGTTTGGAGGAAGTCATTATGGGATGCACATCATCTTCTTCTGATATCAAAGAGGAAGCATCAATCACAAACACACAAGAAGCTGAATGGTTGAAATACTCATCTTACTGGCCAGTTGACCCtcacaatcccaaccatcaatcatga 1323 0.356 MMNKMSNVTCSDLIDAKLEEHQLCGSKQCPGCGHKFDQGGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNNIKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDIQGNTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDHKSVTNINGEAIEGRRDSGSGSCSNSSKEIVHHINHNHRDEMSAVPTPLTNFTSSLDIQHLKNDHFGFIPFRKSFDEVGIGESCRGREIQQASGRCDEHEHEQINATTSFHMSRPSNPISTIISPPPLHHTSIILDDNSYHVSTIMLQNDHFQQQQQQHKIGGSGRSASCLEEVIMGCTSSSSDIKEEASITNTQEAEWLKYSSYWPVDPHNPNHQS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00353 440 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 415 - -
Car06g00353 440 Pfam No apical meristem (NAM) protein 48 194 IPR003441 GO:0003677|GO:0006355
Car06g00353 440 Gene3D NAC domain 56 217 IPR036093 GO:0003677|GO:0006355
Car06g00353 440 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 415 IPR044799 GO:0003700
Car06g00353 440 ProSiteProfiles NAC domain profile. 47 213 IPR003441 GO:0003677|GO:0006355
Car06g00353 440 SUPERFAMILY NAC domain 43 213 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00353 Car-Chr6 3695383 3698608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00353 5 429 NAC Transcription Factor Family AT5G56620 51.542 5.82e-141 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g00353 NAM 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00353 - - mtr:MTR_8g102240 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00353 06 3695383 3698608 Car06g00353 06 3695383 3698608 ECH