Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00352 ATGAAGATCGAGGAATTGGAAGATGCAGAGTGTAGTAGGGTTGAAGAAGAGAATTGTGACAGACAAATTGTTAGGGTTGACGCAAAAAGAGCGTTGGTTGGAGCAGGTGCACGGATCCTATTTTATCCAACACTTTTGTATAATGTGCTTCGTAATAAGATGGAAGCTGAGTTCAGATGGTGGGATCAAATTGACGAGTTTTTGTTACTCGGAGCAGTCCCATTTCCTAAAGACGTTCCTCACTTGAAGAACCTTGGTGTTGGTGGTGTAATTACTTTGAATGAACCCTATGAAACTTTGGTACCTACGTCATTGTATCATGCTCACGGGATTGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCTCCCTCATTTGTGGATATCAGCAGGGCTGTGCAGTTCATTCATTATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGGAGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATACAAGAACATGACACCTGCTGCTGCCCTGGAGTATGTGCGGTCTCGAAGACCTAGAGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCGAAGTTCTTGTCCTTTACCGTACTCTCCATCTGGGGACACAGTTCTAATAACCAAAGATGATCTTGAAGGCTATCATAGCACATCTGATACTAGTATGGAGCTGGCCGTTGTTCCTAAACCCATGATAGCAAGATTATCTTGCCTGTTTGCATCCTTGAAAGTATCTGGTAGTAGTGTACCAATGACAAGGCGGCTGCCAGTTTCAGAGTCACGTGCTTGCTAA 834 0.4317 MKIEELEDAECSRVEEENCDRQIVRVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPTSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHYNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKNMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNKRSSCPLPYSPSGDTVLITKDDLEGYHSTSDTSMELAVVPKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00352 277 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 202 IPR029021 -
Car06g00352 277 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Car06g00352 277 CDD PTPMT1 60 204 IPR044596 GO:0004721
Car06g00352 277 Gene3D Protein tyrosine phosphatase superfamily 60 206 IPR029021 -
Car06g00352 277 PANTHER OS01G0739200 PROTEIN 1 277 - -
Car06g00352 277 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Car06g00352 277 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Car06g00352 277 Pfam Dual specificity phosphatase, catalytic domain 83 203 IPR000340 GO:0008138|GO:0016311
Car06g00352 277 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Car06g00352 277 PANTHER - 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00352 Car-Chr6 3688738 3691351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00352 1 265 Protein tyrosine phosphatase (PTP) family AT2G35680 50.459 2.70e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00352 - - gmx:100817410 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00352 06 3688738 3691351 Car06g00352 06 3688738 3691351 ECH