Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00351 ATGGAGAAGAGCGTGATTCTCCCTTTTctccacctccttctcctcctccacctccCAAATGCAGCAAAATCTTCCATTAATGTTGGCATTGGCATTGGCATTGGAAGTGGTGGTAACATCCCAGTACCTTCAGGACCATCTGTTCCAAACCAAAACAATGCTTACTCAGCTCTTCAAGGATGGAAATCAGCAATCACTGATGACCCTTTAAATATTTTAGACACATGGGTTGGTCCTAATGTTTGTTCATATAAAGGAATCTTTTGTGAAAATCCTCAAGATGAAAATAGTACTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTTAAAGGAACACTTGTAAAAGAACTATCTTTACTATCTGATATCACTCTTTTCCACCTCAATAGTAACAGATTTTCAGGTACAGTTCCTGAATCATTCAAAGACTTTACCTTACTTCAAGAGTTAGACTTAAGCAACAATCAACTTTCTGGCACTTTTCCTACAGTTACTTTAAACATGCCAAACCTCATTTACTTGGATCTTAGATTCAACTACTTCAAAGGGTCACTTCCTGAACAACTCTTTGATAAAAATTTGGATGCAATATTTCTCAACAACAATCTTTTCAGTGGTGAAATACCACAAAATTTTGGTAACTCACCTGCATCAGTGATCAATTTAGCTAACAACAAGTTGAGTGGAAACATACCAGCAAGTTTTGGTTTCATGAGTCCTAAATTAAAAGAGATTCTTTTTATCAATAATCAGTTAACAGGTTGTATACCAGAAGGAGTTGGTGTATTAACAGAAATGCAGGTTCTTGATGTGAGTTTTAATTCACTTGTTGGTCATTTACCTGATACAATATCTTGTTTGCAAAATATAGAGGTTCTTAATTTGGAACATAATAAGCTTTCTGGTGATATATCTGATGTGATATGTTCTTTGAGAAGGTTGTTGAATCTAACTGTTGCTTACAATTTCTTTTCTGGGTTTAGTCAGGAATGTTCAAGGCTTTTCAATTTTGGTTTTGATTTTTCTGATAATTGTATTCCTGGTAGGAATATGCAGAGACCAAGACCTGAGTGTTCTGTGATCCCTGGTGGTAATCTTAATTGTTTTAGAATCCCTACTCCAAAACCTCTAAGCTCGCAAATATTCCTTCATCATTTCCTTGATAGCCACTGCTAA 1182 0.3452 MEKSVILPFLHLLLLLHLPNAAKSSINVGIGIGIGSGGNIPVPSGPSVPNQNNAYSALQGWKSAITDDPLNILDTWVGPNVCSYKGIFCENPQDENSTPFVAGIDLNHANLKGTLVKELSLLSDITLFHLNSNRFSGTVPESFKDFTLLQELDLSNNQLSGTFPTVTLNMPNLIYLDLRFNYFKGSLPEQLFDKNLDAIFLNNNLFSGEIPQNFGNSPASVINLANNKLSGNIPASFGFMSPKLKEILFINNQLTGCIPEGVGVLTEMQVLDVSFNSLVGHLPDTISCLQNIEVLNLEHNKLSGDISDVICSLRRLLNLTVAYNFFSGFSQECSRLFNFGFDFSDNCIPGRNMQRPRPECSVIPGGNLNCFRIPTPKPLSSQIFLHHFLDSHC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00351 393 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Car06g00351 393 Gene3D Ribonuclease Inhibitor 221 357 IPR032675 -
Car06g00351 393 SUPERFAMILY L domain-like 54 338 - -
Car06g00351 393 Gene3D Ribonuclease Inhibitor 51 220 IPR032675 -
Car06g00351 393 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 36 379 - -
Car06g00351 393 PANTHER LRR/EXTENSIN 36 379 - -
Car06g00351 393 PRINTS Leucine-rich repeat signature 149 162 - -
Car06g00351 393 PRINTS Leucine-rich repeat signature 289 302 - -
Car06g00351 393 Pfam Leucine rich repeat 128 182 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00351 Car-Chr6 3680683 3682047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00351 49 362 Leucine-rich Repeat extension Gene Families AT3G24480 53.185 4.04e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00351 - - gmx:100786358 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00351 06 3680683 3682047 Car06g00351 06 3680683 3682047 ECH