Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00344 ATGATGTCAAACATGAATTTCATTTTGTATGTTTTAGTACTTGTTCTTGTTGTTCAAAATCCTAGTGTAACAGAATGTCATACCAAGGGAATTAGACCAAAGCCTTCAAGAGGGATTGGAATATCAACCAATATGACACAAGTGGAAGAATCAGAACAACAATTCATGAAATGGGTGAAATTTGTTGGTGGTCTCAAACACACTGTTTTTGGGACAGCAAAAAATAAGCTTTTTCCTTCTTACACTTTGAATGTTTATAAACAATCTGGTAAAGGAGGGTTTTCATCGATTCAAGCTGCTATTGATTCTCTTCCTTTCATCAATTTAGTGAGAGTTGTTATTAAGGTTCATGCAGGGGTTTACACAGAGAAAGTGAATATTCCTGCTTTAAAAGCGTTCATAACAATAGAAGGAGCAGGTGCAGATAAAACAATTGTTCAATGGGGTGACACTGCTCAAACTCCTAATCCTGCTGCTAAAGGCCAAACACTAGGAACCTATGGTTCTGCAACTTTTGCAGTTAATTCACCTTATTTCATAGCAAAGAACATGACATTCAAAAACACTGCACCAGTTCCAGCACCAGGAGCAGTTGGAAAACAAGCAGTGGCATTGAGAATTTCAGCAGATACAGCAATATTTGTTGGATGTAAATTCTTAGGAGCACAGGACACATTGTATGATCATTTGGGTAGGCACTATTACAAAGATTGTTATATTGAAGGCTCTGTTGATTTCATATTTGGCAATGCACTGTCTCTTTTTGAGGGGTGTCACGTGCATGCAATAGCAATAAACACAGGAGCATTAACAGCACAAGGAAGGAGCAGTTTATTAGAAGACACGGGATTCTCATTTGTTCACTGTAAGGTCACGGGATCAGGAGCACTATACCTTGGAAGGGCTTGGGGTCCATTTTCTCGTGTTGTCTTTGCTTACACATACATGGACAATATCATCATTCCCAAAGGATGGTATAattggggtgatcccaaccgtgaaatGACTGTATTCTATGGACAATACAAATGCACGGGACCAGGAGCTAGCTATGCAGGGAGGGTATCATGGTCAAGGGAGCTCACTGATGAAGAAGCTAAACCTTTTATTTCACTTAGCTATATTGATGGCTCTGAATGGATTAATTCTTTCTTTTGA 1158 0.38 MMSNMNFILYVLVLVLVVQNPSVTECHTKGIRPKPSRGIGISTNMTQVEESEQQFMKWVKFVGGLKHTVFGTAKNKLFPSYTLNVYKQSGKGGFSSIQAAIDSLPFINLVRVVIKVHAGVYTEKVNIPALKAFITIEGAGADKTIVQWGDTAQTPNPAAKGQTLGTYGSATFAVNSPYFIAKNMTFKNTAPVPAPGAVGKQAVALRISADTAIFVGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAINTGALTAQGRSSLLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASYAGRVSWSRELTDEEAKPFISLSYIDGSEWINSFF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00344 385 Gene3D - 82 384 IPR012334 -
Car06g00344 385 PANTHER PECTINESTERASE 2 384 - -
Car06g00344 385 SUPERFAMILY Pectin lyase-like 79 383 IPR011050 -
Car06g00344 385 Pfam Pectinesterase 88 377 IPR000070 GO:0030599|GO:0042545
Car06g00344 385 ProSitePatterns Pectinesterase signature 2. 240 249 IPR033131 -
Car06g00344 385 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00344 Car-Chr6 3636734 3639090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00344 1 381 Carbohydrate Esterase AT5G47500 42.670 1.60e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00344 K01051 - gmx:100802832 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00344 06 3636734 3639090 Car06g00344 06 3636734 3639090 ECH