Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00343 ATGGGAAGAGCCACAAGGTGGTTGAAGAGTTTGTTTGGGATAAAGAGAGACAAAGAACACAAAAATAATTCAAGCACAAAATGGACTCCACCTCCTCCTCCTCATGCTTTTTCAGAGAGAGATTCAAGAGGATTGTGTCATAATCCAGCTACTATACCCCCTAACATTTCACCTGCTGAAGCTGCTTGGGTTCAATCCTTCTACTCAGAAACTGAGAAGGAGCAGAACAAGCAtgccattgccgttgcagctgccacggcagcagcagcagatgctgccgtggctgctgctcaagctgctgtggctgttgttAGGTTAACCAGCCACGGCAGAGACAGCATGTTTGGTGGTGGACACCAGAGATTTGCTGCTGTCAAGATTCAAACCATATTTCGGGGTTACTTGGCAAGGAAAGCACTAAGAGCCTTAAAGGGATTGGTAAAGTTACAAGCACTTGTGAGAGGGTACTTAGTAAGGAAGCAAGCAACAGCAACACTACACAGTATGCAAGCTCTAATTAGAGCTCAAGCAACAGTAAGGTCTCATAAATCTCGTGGACTCATCAACACAAAGAATGAAACACATAGATCTCAAACACAAGCAAGAAGATCCACGGAAAGGTACAATGAGAGTAATAGGAGTGAATACACAGCATCAATTCCAATCCACAGTAGAAGACTATCATCTTCATTTGACGCTACAATGAACAACACAAACAGTTATGAAATTGAGAGTCCAAAAATAGTAGAAGTTGATACTGGAAGACCAAAATCAAGGTCTAGAAGAAGCAACACATCAATTTCAGATTTTGGAGATGACCCATCATTTCAAACACTATCATCTCCTCTTCCAATCACTCCATCTCAATTATTCATTCCAAATCAAAGAAATTTCAACGAATCAGATTGGGGAATAACAGGTGAAGAATACAAATTTTCAACAGCACAAAGCACACCACGTTTCAAAAACTCTTGCACTTGTGGTTTTATTGCACCTTCAACACCTAAAACAATTTGTGGAGACAATTTTTACATTGGTGAATATGGTGATTTTCCTAATTACATGGCTAATACACAGTCTTTTAAGGCTAAGTTAAGGTCTCATAGTGCTCCAAAGCAAAGACCAGAACCAAAAAAGAGGGTTTCACTGaatgaaatgatggaatctagaagtagtttgagtggtgttagaatgcagagatcttgttcacaGATTCAAGAAGCTGTTAATTTTAAGAATGCTGTTATGAGGAAACTAGATAGGTCCACTGATTTTGATGGAAATTTTTCCAATCAGAGGAAGTGGTGA 1308 0.3502 MGRATRWLKSLFGIKRDKEHKNNSSTKWTPPPPPHAFSERDSRGLCHNPATIPPNISPAEAAWVQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDSMFGGGHQRFAAVKIQTIFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLINTKNETHRSQTQARRSTERYNESNRSEYTASIPIHSRRLSSSFDATMNNTNSYEIESPKIVEVDTGRPKSRSRRSNTSISDFGDDPSFQTLSSPLPITPSQLFIPNQRNFNESDWGITGEEYKFSTAQSTPRFKNSCTCGFIAPSTPKTICGDNFYIGEYGDFPNYMANTQSFKAKLRSHSAPKQRPEPKKRVSLNEMMESRSSLSGVRMQRSCSQIQEAVNFKNAVMRKLDRSTDFDGNFSNQRKW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00343 435 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 423 - -
Car06g00343 435 MobiDBLite consensus disorder prediction 186 210 - -
Car06g00343 435 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Car06g00343 435 MobiDBLite consensus disorder prediction 244 279 - -
Car06g00343 435 PANTHER IQ-DOMAIN 5-RELATED 1 423 - -
Car06g00343 435 SMART iq_5 142 163 IPR000048 GO:0005515
Car06g00343 435 SMART iq_5 119 141 IPR000048 GO:0005515
Car06g00343 435 MobiDBLite consensus disorder prediction 14 45 - -
Car06g00343 435 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Car06g00343 435 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Car06g00343 435 Pfam Protein of unknown function (DUF4005) 316 397 IPR025064 -
Car06g00343 435 ProSiteProfiles IQ motif profile. 168 197 IPR000048 GO:0005515
Car06g00343 435 MobiDBLite consensus disorder prediction 260 279 - -
Car06g00343 435 MobiDBLite consensus disorder prediction 182 219 - -
Car06g00343 435 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Car06g00343 435 Gene3D - 119 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00343 Car-Chr6 3631564 3633880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00343 1 398 IQD Protein Family AT3G16490 51.605 1.71e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00343 - - mtr:MTR_8g102400 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00343 06 3631564 3633880 Car06g00343 06 3631564 3633880 ECH