Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00335 ATGGAACCTTTGGACGATGCGGAATCGCAACTCGAACGAATCGACTCTGAGTTAACGTCTACAAGCTCTGGTTCCGGCATTTCCTCCGTATTCAGCGCTGACGATTTCCGTAACTTCAATAGCTCCGGCGACATTTCCTCTATCAGCAGTGGCTCCGGGGAGATTCCGTCTTTCACGGTGAACCGAGTGATTCTTGCACCTCCGTTGAGTGCTGCATCCAATGAAGCGGACAACGAGGCCGCTGTGCCGGCGGTGAGGGAGAAGTGCGTGGGAAGGAATAACAAGGGAGTGAGTTGGGGACATACTTCGGTGATTGGAAGGCGGAAAGAGATGGAGGACGCCGTCGCCGTTATTCCGGGATTCATGTCTCGCACTTGCGATCATGTCGGAGGTTGTACGGCTCCAGGTTCAAGATCTTCCGGAGAGATCGGTCCTGTTCATTTCTTCGGCGTTTACGACGGACACGGTGGCTCTGAGGTGGCTAAATTTTGTGCCAAGCGAATGCATGATGTTATAGCAGAGGAGTGGGACCGAGAAATAGAAGGCGGTGCTGAATGGCAGAGAAGGTGGGAAGCAGTATTTGCTAATGGTTTTGAGAAAACTGACAATGAAATCGAATCAGACGCAGTTGCACCAGAGATGGTTGGATCTACTGCTTCTGTGGTTGTTCTATCTGGTTGCCAAATTATTACATCCAACTGTGGCGATTCAAGGGTTGTTCTTTGCCGCAGGACTCAAACACTCCCATTGACAGTGGATCAGAAGGTCTACTCAACCCATTTATCTACTTTCTTGTTTTATACTGTACATTCTTGTTTATTACgttctaaattacggttgtag 843 0.4828 MEPLDDAESQLERIDSELTSTSSGSGISSVFSADDFRNFNSSGDISSISSGSGEIPSFTVNRVILAPPLSAASNEADNEAAVPAVREKCVGRNNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHVGGCTAPGSRSSGEIGPVHFFGVYDGHGGSEVAKFCAKRMHDVIAEEWDREIEGGAEWQRRWEAVFANGFEKTDNEIESDAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTLPLTVDQKVYSTHLSTFLFYTVHSCLLRSKLRL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00335 280 SMART PP2C_4 87 280 IPR001932 -
Car06g00335 280 SUPERFAMILY PP2C-like 89 259 IPR036457 -
Car06g00335 280 ProSiteProfiles PPM-type phosphatase domain profile. 98 280 IPR001932 -
Car06g00335 280 CDD PP2Cc 100 258 IPR001932 -
Car06g00335 280 ProSitePatterns PPM-type phosphatase domain signature. 148 156 IPR000222 GO:0043169
Car06g00335 280 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 53 255 - -
Car06g00335 280 PANTHER ALPHABET, ISOFORM E-RELATED 53 255 - -
Car06g00335 280 Pfam Protein phosphatase 2C 106 258 IPR001932 -
Car06g00335 280 Gene3D - 87 262 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00335 Car-Chr6 3573746 3579101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00335 99 255 PP2C-type Phosphatase Gene Family AT4G26080 47.853 7.38e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00335 K14497 - gmx:100793293 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00335 06 3573746 3579101 Car06g00335 06 3573746 3579101 ECH