Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g00320 | ATGGTGAGAGTAATTCCCATGGCTAGTTCTATTCGACCCACTCTTTCTTCATTTAGGTTTTCACCTCTCTTCAATCGCTCTCCCAGATTCTCTTTCTCCCATTTTTCCACCGCAGTTCCACAATCCCAAAGTTTTGGCATAAAAGCGTGTAGATTGTTAAGACAAGATGGAAACTCTATGAGAGTTATGTCATCTGGGAATGTGTCCTCACCACTCACTGCTGCTTCATCAGAAAATGTTCTGGAATGGGTTAAACAAGATAAGAGAAGAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGATAGAACAATTAAATTTTATACTGAGTGCCTGGGAATGAAGCTCCTCAGAAAGCGTGACATACCCGAAGAGAGATATACTAATGCTTTTCTTGGATATGGACCTGAAGACTCACAATTTGTTATTGAACTCACGTACAATTACGGAGTTGACAAGTATGATATTGGAAGTGGATTTGGCCATTTTGGTATTGCTGTTGATGATGTCTCAAAAACAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTTAAAGGAGGCAAAACAGTAATTGCATTTGTTGAAGATCCGGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCCGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAATCGTTCGATAGAATTTTATGAGAAGGCTTTTGGTATGGAGCTTCTTCGTACACGAGATAATCCAGAGAACAAGTATACCATAGCAATGCTCGGTTATGGTCCAGAAGATAAAACTACCGTTCTGGAGTTGACTTACAATTATGGAGTCACCGAATATGATAAAGGAAATGCTTACGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCGATTAAACTATCCAAGGGAAAGGTTACTCGAGAACCTGGACCACTGCCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCTGATGGATGGAAAACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG | 1059 | 0.406 | MVRVIPMASSIRPTLSSFRFSPLFNRSPRFSFSHFSTAVPQSQSFGIKACRLLRQDGNSMRVMSSGNVSSPLTAASSENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSQFVIELTYNYGVDKYDIGSGFGHFGIAVDDVSKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPENKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSKGKVTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE | 352 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g00320 | 352 | ProSitePatterns | Glyoxalase I signature 1. | 93 | 114 | IPR018146 | GO:0004462|GO:0046872 | |
| Car06g00320 | 352 | CDD | GlxI_Ni | 91 | 212 | - | - | |
| Car06g00320 | 352 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 91 | 211 | IPR004360 | - | |
| Car06g00320 | 352 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 223 | 338 | IPR004360 | - | |
| Car06g00320 | 352 | PANTHER | LACTOYLGLUTATHIONE LYASE | 19 | 352 | - | - | |
| Car06g00320 | 352 | Gene3D | - | 62 | 215 | IPR029068 | - | |
| Car06g00320 | 352 | TIGRFAM | glyox_I: lactoylglutathione lyase | 221 | 344 | IPR004361 | GO:0004462|GO:0046872 | |
| Car06g00320 | 352 | TIGRFAM | glyox_I: lactoylglutathione lyase | 76 | 223 | IPR004361 | GO:0004462|GO:0046872 | |
| Car06g00320 | 352 | ProSitePatterns | Glyoxalase I signature 1. | 223 | 244 | IPR018146 | GO:0004462|GO:0046872 | |
| Car06g00320 | 352 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 89 | 219 | IPR029068 | - | |
| Car06g00320 | 352 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 221 | 344 | IPR029068 | - | |
| Car06g00320 | 352 | Gene3D | - | 217 | 352 | IPR029068 | - | |
| Car06g00320 | 352 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 90 | 214 | IPR037523 | - | |
| Car06g00320 | 352 | PANTHER | LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED | 19 | 352 | - | - | |
| Car06g00320 | 352 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 220 | 344 | IPR037523 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g00320 | Car-Chr6 | 3432280 | 3437155 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g00320 | 223 | 341 | Calmodulin-binding Proteins | AT1G08110 | 27.586 | 3.40e-09 | 55.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g00320 | K01759 | - | gmx:100780463 | 615.535 |