Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00308 ATGAATAGAAGTGTTAATCTTCAAAGCTCACCGGTGCAACAAATGATGGCCGGAAACCCTAACAACTGGTGGAACATCAATAGTACCATTCCTACAACTGATCATCATCATCACCAACCTAATTTCTTCTCCACACCATCTTCCAATAATTACTTTATGACTACTCCATATGCATCTTCTCTTCCTTCTTGCCATGAAAATCAAGAACTTCCTGACTCATGGAGTCAACTACTCATGAGTGGCATGGTGTATGAAGAAGATAAGGGTAGTATGTGCCAGGCTCTAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGCTCAGTGAACAACTATGTCTATGGAAATGAAGAATTTAATCCTATTAATTGGTCTCAAATAGTGCcttcttcttcttcttcctcAAAATCATGTGCAACAAGTTTCACCACCAACATGTTGGATTTCTCTAACAATAAAATGGATACAAGATCTCCACCGTCAGATCCATCTTCAGAGTGCAACAGCAGTGGAGGTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACAATCTACAACTCAGTCTACCTTCAAGGTTAGGAAGGAAAAGTTAGGTGACAGAATTACAGCCCTTCATCAACTCGTTTCCCCATTTGGAAAGACTGACACAGCATCTGTCTTATTAGAATCTATTGGTTATATCAGATTCCTTCAGAGTCAAATTGAGGCACTTAGCTTACCATACTTGGGAAATGGATCAGGGAACATGAGGCAGCAACAAAAATGTGTTCAAGGAGAAAAGAATTGTATATTCCCTGAAGATCCTGGTCAGTTGCTGAATGAAAAGTGTTTGAAGAGAAAGGCAGCTAGTGAGCAGGAATGTGAAGAAGAAAAGAAGGACCTGAGGAGTAGAGGACTGTGTTTAGTTCCAGTGTCATGCACACTCCAAGTTGGAAGTGAGAATGGAGCAGATTATTGGGCTCCAGCTGCATTTGGTGGTGGATTTCATTAG 987 0.3992 MNRSVNLQSSPVQQMMAGNPNNWWNINSTIPTTDHHHHQPNFFSTPSSNNYFMTTPYASSLPSCHENQELPDSWSQLLMSGMVYEEDKGSMCQALNASLVDVKQESSVNNYVYGNEEFNPINWSQIVPSSSSSSKSCATSFTTNMLDFSNNKMDTRSPPSDPSSECNSSGGGGALKKARVQQSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLPYLGNGSGNMRQQQKCVQGEKNCIFPEDPGQLLNEKCLKRKAASEQECEEEKKDLRSRGLCLVPVSCTLQVGSENGADYWAPAAFGGGFH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00308 328 MobiDBLite consensus disorder prediction 148 170 - -
Car06g00308 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Car06g00308 328 Coils Coil 272 296 - -
Car06g00308 328 Gene3D - 180 241 IPR036638 GO:0046983
Car06g00308 328 MobiDBLite consensus disorder prediction 148 190 - -
Car06g00308 328 PANTHER OS05G0228400 PROTEIN 18 313 - -
Car06g00308 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 240 IPR036638 GO:0046983
Car06g00308 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 313 - -
Car06g00308 328 CDD bHLH_AtbHLH_like 188 237 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00308 Car-Chr6 3342027 3345837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00308 1 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.228 4.02e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00308 - - gmx:100785156 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00308 06 3342027 3345837 Car06g00308 06 3342027 3345837 ECH
Car06g00308 06 3342027 3345837 Car08g01769 08 27638421 27644914 PCT