Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00296 ATGTTCCGATCATCATTCGCTTCCTGCAAAACCCGACACTTAACCGATGTTATGGAAAAACCACTATTTGCACCCTCCAATTCCAATATCATCTCTTTTAACATTCCCAGACCCAAAATCtcttctttttcttcttcttcttcttcAAACAACAACAACACTATCAAATCACCTCAACCCCTTCTCAAACCAACCAACCTCGCTTTCTACCAAAACTCTAATGATTCTACCAAAAACGTTATcatcaaaaacaacaaaaacaagaacaagaaaaagaagaagaagaagaagaatcacacccacaacaaaaacaGAGCTTTTCCTTTTAATTCATGTGCTAAAGACACAAACTTTGATAGCTATTATTGGTTATATAGCAGCGACGACGAAGACGATGAAACAGACACACTTTTCTCTTCAAAGAGTCACTCTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCGATTCCTCTAAGTCTCGTCGCCGGAAATCATCTCGCCGGAAAACTGACCGGAGTTCTGACATGGGTGTTCTTCCGTTGAACGGTAAAGTGAAGGACACATTTGCAGTGGTGAAACGCTCTAGTGATCCGTACAATGATTTCAGAACTTCAATGGTGGAGATGATCGTTGAGAAACAGATTTTTTCGCCAACTGATTTGGAGAATCTTTTACAGTGCTTTCTCTCACTTAATTCGTTTCATCATCACAAGATCATTGTTGAAGTTTTCACAGAGATTTGGGAAGCACTTTTTTCTGACTGGCTTTGA 801 0.3283 MFRSSFASCKTRHLTDVMEKPLFAPSNSNIISFNIPRPKISSFSSSSSSNNNNTIKSPQPLLKPTNLAFYQNSNDSTKNVIIKNNKNKNKKKKKKKKNHTHNKNRAFPFNSCAKDTNFDSYYWLYSSDDEDDETDTLFSSKSHSSXXXXXXXXXXXXXXXXXXXSDSSKSRRRKSSRRKTDRSSDMGVLPLNGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPTDLENLLQCFLSLNSFHHHKIIVEVFTEIWEALFSDWL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00296 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-LIKE 24 263 - -
Car06g00296 266 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 199 262 IPR006458 -
Car06g00296 266 Coils Coil 82 102 - -
Car06g00296 266 ProSiteProfiles OVATE domain profile. 201 260 IPR006458 -
Car06g00296 266 Pfam Transcriptional repressor, ovate 205 262 IPR006458 -
Car06g00296 266 MobiDBLite consensus disorder prediction 134 190 - -
Car06g00296 266 MobiDBLite consensus disorder prediction 42 109 - -
Car06g00296 266 MobiDBLite consensus disorder prediction 42 83 - -
Car06g00296 266 MobiDBLite consensus disorder prediction 84 103 - -
Car06g00296 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 24 263 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00296 Car-Chr6 3246629 3247429 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car06g00296 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00296 - - cam:101496006 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00296 06 3246629 3247429 Car06g00296 06 3246629 3247429 ECH