Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00289 ATGACTAATGGCGAACCCTCCGTCACCAACCTCCCAACCATCAAGTTCACCAAATTATTCATTAATGGAGATTTCGTTGATGCCATTTCAGGGAAGACATTTGAAACAATAGACCCAAGAAGAGGAGAGGTGATAGCGAGGATTAGCGAAGGAAGCAAAGAAGACATTGACGTTGCTGTAGAGGCGGCACGCCACGCATTCGACTCCGGTCCATGGCCTCGCCTTTCCGGTGCTGAGAGAGCAAAAATAATGATGAAATTTGCGGAACTAATTGATGAAAACATAGAAGAGCTAGCTGCATTAGATGCAATTGATGCAGGAAAGTTGTACCATATGTGTAAGGCATTGGACATTCCAGCAGCAGCAAATACTCTGCGTTACTATGCAGGTGCTGCTGATAAAATTCATGGAGAGGTTTTGAAAGTTGCTAGAGAGTTCCATGCTTATACATTGATGGAACCAATTGGTGTTGTTGGACATATCATTCCTTGGAATTTTCCCACTTCCATGTTTTTTCTTAAGGTTAGCCCTTGTTTAGCTGCTGGCTGTACCATGATCATCAAACCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAATTGGCAGGAATCCCAAATGGAGTGTTGAATGTAGTGCCCGGATTTGGGCCAACTGCCGGTGCTGCAGTCAGCTCACACATGGACATTGATGCGGTGAGCTTTACTGGTTCAACACAAACTGGGCGTGAAATAATGCAAGCTGCAGCTAAGAGTAATCTAAAACATGTTTCACTTGAATTAGGAGGCAAGTCACCTCTCATTATTTTTGATGATGCTGATATTGACAAAGCTACTCACCTTGCTCTATTAGGCATCTTATTAAACAAGGGTGAAGTGTGTGTTGCAAGTTCACGTGTGTTCGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGGTAGAAAAGGCTAAAGCTTGGGTCATTGGGGACCCTTTTGATCCTAAAGTTCAGCAAGGGCCTCAAGTTGACAAAAAACAATTTGAAAAAATTCTTTCATATATAGAACATGGGAAGAGAGAAGGAGCTACCCTTTTGACTGGGGGTAAAACAGTAGGAAACAAGGGATATTACATTGAGCCAACAATTTTCTCAAATATAAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGTCCAGTGATGGCACTCAAGAAGTTTAAGACTATTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAGGAATTGTGACAAAGAATTTGGATATAGCAAACACTATGTCAAGGTCCATTCGTGCAGGCACAATTTGGATAAATTGTTATTTTGCTTTTGGAGATGA 1365 0.4029 MTNGEPSVTNLPTIKFTKLFINGDFVDAISGKTFETIDPRRGEVIARISEGSKEDIDVAVEAARHAFDSGPWPRLSGAERAKIMMKFAELIDENIEELAALDAIDAGKLYHMCKALDIPAAANTLRYYAGAADKIHGEVLKVAREFHAYTLMEPIGVVGHIIPWNFPTSMFFLKVSPCLAAGCTMIIKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAVSSHMDIDAVSFTGSTQTGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKATHLALLGILLNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVIGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKTVGNKGYYIEPTIFSNIKEDMLIAQDEIFGPVMALKKFKTIEXXXXXXXXXXXSRNCDKEFGYSKHYVKVHSCRHNLDKLLFCFWR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00289 454 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Car06g00289 454 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 410 IPR016163 GO:0016620
Car06g00289 454 SUPERFAMILY ALDH-like 11 410 IPR016161 GO:0016491
Car06g00289 454 Pfam Aldehyde dehydrogenase family 26 410 IPR015590 GO:0016491
Car06g00289 454 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 266 IPR016162 GO:0016491
Car06g00289 454 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Car06g00289 454 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 411 - -
Car06g00289 454 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 2 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00289 Car-Chr6 3181928 3186554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00289 1 410 Aldehyde Dehydrogenase Gene Family AT3G24503 72.222 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00289 K12355 - gmx:100811540 722.235