Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00277 ATGAATTCCGCCATAGATAACAGAGAATTAAGTAGTCCAAATGACATTTTCAATGGAATTGAGAGAAATGGGCATTCAGTATCCACTTATGGTGAGGTGAAAGCTAAACATCGATTGGTTTTGGTTCAATGGTTAAATAGTCTTGTTCCTTCTTTGGATTTTTCGACATATGTCACAGATGGTGAGTTAAGAGCATGCTTGAGCAATGGTACAGTTTTGTGCCTGATACTAAACAAGCTGCGGCCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCTCTCCCATCTCAATCAGAAAATGTAAAAACGTTTCTGAAAGCTTTGGATGGATTGGGGTTGCCACGGTTCGAAATATCAGACCTTGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCAAAAAGTCTGCAGCATTCTTTGGGAGATAATGTTTCTGTAACCAATTGCAATTCATCAAGTCCTCGTGGGTTTGCACCTTCCAGTTTTCATTATTCACCGCCGCCATTTGGTGTGGACCGGACGAAGGGTTTACCCGAGTCAAGGTTTCATCGTGTTAAGAGTAGCCCTCTTATGACGGAACCATCAGCTTCATTAATATACCAAGTTGGTCATAAGTTCCATGAGGTGTTTCAAATTAAACCTGGAAGCTACGCAGATCTTCCTGCTTCAAAAATATCAGAAATGATGAAATCAAACAGTTTAGATAATGCTCCCACCCAGTCGCTATTAAGTGTTGTCAATGGTATTCTCGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGAGTGGCGTGCTTGTTGAGAAAGGTTTCACAGGAGATTGAGAGGCGCATATCAACTCAAGCAGAACATATGCGCATTCAAAGTAATCTTTTTAAGGCTCGGGAAGAAAAATATCAATCGAGAATAAGAGTACTTGAGACACTTGCATCTACAAATAGTAAAGAGAATGAGATATTTGCTAGCCAGCTTCAGCAGTTGAAGGTTGGTTTCTTACTTTGCATCATAAACAACATATTGATACACTACAAAGAAATGATAATACAAGAGGTTTTAATTAGATTCTTTTCATGTTTTGACTCTAAAATACAGGGTCTTATCGTCAaagaggaagaaaagaaggaagatgaaaaagaagTTATTAGGTTGACGAAAATGCTGGAGGACAAAATTTTAGAAATTTCAGAATTGAAGCAAAAACTGGAAGCAGCCAAAAAAACAAATGAAGCACAATTCTCACAGTTGGAAGAAGAAGCTACAGATGCTAAAGCAGAAACGAGACATAAATATCAAGAATATGAGTATCGATTAGAAGAATTGAGGAATGAGGTTAAGGAACTTGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAACATGAAAAAGGACCAATTGCTGTCTAAATTGAGATTATCTTGGGAATCCATTAAGCAAGATGTTAAGAAAGGGGAAACGGTTTATGCAGAGGAGTGTAATCGATTTGGTGTAAATCTTAAACCACTCATACATGCATCTGCAAACtatcacactgtccttgctgaaaatagaaaattgtttaatgaagtccaagaactaaaaggtagcattatccatgtctatcttctagttttttttatatataagtgtactgtgaattcacacatgtttttttatacaggaaatatcagagtcttttgtcgaattagaccatttcttgtaggcaaaaaggaaaaacagtctattgtagaagacataggtgaaaatgatttggttgtggcaaatccctccagagaagggaaagatgcaattcgatcatttaagttcaataagattttcggtcctgccgcaactcaagtggacgtatactctgacattcaacctttggtaagatcagtactagatggatataatgtatgcatattcgcttatggccaaactggttcagggaaaactttcacaatgactggtccaaacggagcaacaaacgagactctcggtgttaattatcgagctctaaatgacctcttcaaaatttccacaagtagagcaagcttcatagactatgagatttgggttcaaatggttgagatatataacgagcaagttcgtgacttgttatcaaccgttggttctccaaaaagatatcctttttttaaaatttcatcagacaatttattgtcagtaccagatgctagcatgttccctgttaagtcaccttcagatgtcattaagttgatggacattggacttaaaaatagagctatcggtgcgactgctatgaacgaaagaagtagtcgttctcacagtgtggtctcaattcatgttcgctggaaggatttcaagtctggttctactctgcatggtaatcttcatttggtagatttggcaggaagcgaaagagtagatcgctctgaagtcaccggagataggcttagggaggcacaatatataaacaaatcactttcggccctcggagatgtcatttttgccctttctcaaaagagctcccatgtaccatatagaaacagcaagcttactcaacttttgcaaacttctcttggtggtcaagcaaagactctcatgtttgtccaaattaactcagacgtgagttcgtattctgaaactcttagtactttgaagtttgccgaaagagtttcttctgttgaactaggtgctgcacggaataacaaggatgctagagaattgatggaacagGTGGCTTCCTTGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAATTGCCAAACCCGTCAGTTGGTGGTATTTCTAAGCAAATTCAAAAACTATCAAGTGGAAGTTATAAGCACCTTGAAAGTGATATCCAACAAGCAATGGATGATCATATACAGCAAAATGAATTTCTCCAACCAGAATTTTCAGATGCAGATTTTCAAGAAAGATCAAGTGACATTTCTGACAATAGTCTTGCTCCGGGCACAGATTTTGATTGTTCTTCTGAAAATTCCATTTTCAATGAAGCCAGAAAAACTTCAAATAAGACACAGAAGTCGAAAGGATTACTCAAAAGTGTCCGAGCAGTAAGGAAATTAATCCGAGTCCCATCTACCACGGCGATAACAAAGGATTCCTTTAAGAAATCACCAGGTATGACAAGAAGCCCCAGTATTGGCCAACTTAAAGCTCCAAAACGGTGGCAGTAA 3198 0.2405 MNSAIDNRELSSPNDIFNGIERNGHSVSTYGEVKAKHRLVLVQWLNSLVPSLDFSTYVTDGELRACLSNGTVLCLILNKLRPGSVTMVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLILRAKSLQHSLGDNVSVTNCNSSSPRGFAPSSFHYSPPPFGVDRTKGLPESRFHRVKSSPLMTEPSASLIYQVGHKFHEVFQIKPGSYADLPASKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHMRIQSNLFKAREEKYQSRIRVLETLASTNSKENEIFASQLQQLKVGFLLCIINNILIHYKEMIIQEVLIRFFSCFDSKIQGLIVKEEEKKEDEKEVIRLTKMLEDKILEISELKQKLEAAKKTNEAQFSQLEEEATDAKAETRHKYQEYEYRLEELRNEVKELEASSDSKYQEWNMKKDQLLSKLRLSWESIKQDVKKGETVYAEECNRFGVNLKPLIHASANYHTVLAENRKLFNEVQELKGSIIHVYLLVFFIYKCTVNSHMFFYTGNIRVFCRIRPFLVGKKEKQSIVEDIGENDLVVANPSREGKDAIRSFKFNKIFGPAATQVDVYSDIQPLVRSVLDGYNVCIFAYGQTGSGKTFTMTGPNGATNETLGVNYRALNDLFKISTSRASFIDYEIWVQMVEIYNEQVRDLLSTVGSPKRYPFFKISSDNLLSVPDASMFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRWKDFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLREAQYINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKDARELMEQVASLKNTILKKDEEIERLKLPNPSVGGISKQIQKLSSGSYKHLESDIQQAMDDHIQQNEFLQPEFSDADFQERSSDISDNSLAPGTDFDCSSENSIFNEARKTSNKTQKSKGLLKSVRAVRKLIRVPSTTAITKDSFKKSPGMTRSPSIGQLKAPKRWQ 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00277 1065 Coils Coil 893 920 - -
Car06g00277 1065 Pfam Calponin homology (CH) domain 40 137 IPR001715 GO:0005515
Car06g00277 1065 Pfam Kinesin motor domain 568 889 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 Gene3D Kinesin motor domain 559 927 IPR036961 -
Car06g00277 1065 PANTHER KINESIN-LIKE PROTEIN KLP-3 560 1065 - -
Car06g00277 1065 SUPERFAMILY Calponin-homology domain, CH-domain 37 145 IPR036872 -
Car06g00277 1065 MobiDBLite consensus disorder prediction 1037 1065 - -
Car06g00277 1065 ProSiteProfiles Kinesin motor domain profile. 562 889 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 MobiDBLite consensus disorder prediction 1037 1053 - -
Car06g00277 1065 PANTHER KINESIN-LIKE PROTEIN KLP-3 381 541 - -
Car06g00277 1065 ProSiteProfiles Calponin homology (CH) domain profile. 35 142 IPR001715 GO:0005515
Car06g00277 1065 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 6 332 - -
Car06g00277 1065 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 381 541 - -
Car06g00277 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 562 922 IPR027417 -
Car06g00277 1065 SMART ch_5 37 140 IPR001715 GO:0005515
Car06g00277 1065 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 332 - -
Car06g00277 1065 SMART kinesin_4 560 897 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 PRINTS Kinesin heavy chain signature 839 860 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 PRINTS Kinesin heavy chain signature 759 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 PRINTS Kinesin heavy chain signature 790 808 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 PRINTS Kinesin heavy chain signature 636 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00277 1065 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 560 1065 - -
Car06g00277 1065 Gene3D - 29 143 IPR036872 -
Car06g00277 1065 Gene3D - 383 424 - -
Car06g00277 1065 Coils Coil 388 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00277 Car-Chr6 3069509 3075777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00277 379 920 Calmodulin-binding Proteins AT5G65930 31.993 3.18e-64 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00277 K10406 - tcc:18604123 979.548