Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00256 ATGAGAACccatcatctcctcctatttaccatcctctttttcgcatccacattctcctatctccatcctgcatccgccaCCGGAGAACAACCTCCGACCACCGGCAACAACGGCGACACCGAATTCATCCGCTCTAGTTGCAATACAACACTATACCCTGACATATGCTACACTTCCCTCTCTCGCTACGCCAATGCAGTTCAACAAAATCCCGGCCAACTCGCTCGCGTCGCCATATCCGTTAGCCTCTCCAAAGTCCACCGCATCGCTTCCTACATCTCCAACCTCACGCACGAAGCCGATTACGGCGCATCCTCACGCGCTGTTCTCGCTCTCCACGACTGTTTCTCAAACCTCGACGACGCCGTCAGCGAAATCCGCGGCTCGCTTAAACAGATGCGTCAGTTAGGAGCCGCCGGCTCTGGAACCGACTCGTTCCTCTTTCAGATGAGTAACGTACAGACGTGGATGAGCGCGGCGCTTACTGATGAAGAAACGTGTACGGACGGATTTCAGGATGTACCGGAATGTCCGATGAAATCGGATGTATACAATCGTGTCACCAGAGTGAAGAAGTTCACGAGTAATGCTTTGGCACTCGTTAATAGTTACGCTAACAAAGGACCTTTGAATTTGATTACTTTTTTTTTTCTTCCAATCTCAGAATGA 669 0.4529 MRTHHLLLFTILFFASTFSYLHPASATGEQPPTTGNNGDTEFIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARVAISVSLSKVHRIASYISNLTHEADYGASSRAVLALHDCFSNLDDAVSEIRGSLKQMRQLGAAGSGTDSFLFQMSNVQTWMSAALTDEETCTDGFQDVPECPMKSDVYNRVTRVKKFTSNALALVNSYANKGPLNLITFFFLPISE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00256 222 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 204 IPR035513 -
Car06g00256 222 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 204 IPR006501 GO:0004857
Car06g00256 222 CDD PMEI-like_3 45 206 - -
Car06g00256 222 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 207 - -
Car06g00256 222 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 204 IPR035513 -
Car06g00256 222 SMART PMEI_2 38 200 IPR006501 GO:0004857
Car06g00256 222 Pfam Plant invertase/pectin methylesterase inhibitor 42 200 IPR006501 GO:0004857
Car06g00256 222 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 5 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00256 Car-Chr6 2647891 2649063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00256 6 200 Carbohydrate Esterase AT5G53370 25.123 6.64e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00256 - - cam:101503417 439.113