Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00251 ATGGCTGCTAAACGATCTTTCGATGATTCTGATCAAGACAAACACAAACCAAATGACAAACGGATGAGAAGTTCTACGACAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTAAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAATGAAGAGGTGGAGAGAGCAATGAGACGATGTTGTCCAACAAGAACAATAACAAGATCACCTTCATTAAGACTACAAGCAATGGAACAAGCATCAAGTTTTGAATTCATGTTTAGAAAGAAACTTTCACTTCCAATATTCACAGGTAGTAGAATACTAGACATAGATGGAAATCCAATTCATGTGATTCTTGTTGACAAAAGCAATGGTGAAATAGTACCAACAAGTTTACCTCAACCTATAAAGATAGAAATTGTTGTTCTTGATGGAGATTTTCCTCCTAGTGAAAAGGAATCATCATGGAGTAGTGAAGAATTTAATAGCAATATTGTGAAAGAGAGAACAGGGAAGAGACCATTGCTTACTGGAGAATTGAATATTACTATGAGAGATGGGATTGCACCAATTGGGGATATTGAATTCACTGATAATTCTAGCTGGATTCGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCTCATGGGACTAATCTCAATGTAAGAATTCGTGAAGGCATCACTGAACCTTTTATCGTTAAGGATCACCGTGGCGAATTGTACAAGAAACACCACCCACCAATGCTAAAGGATGAAGTGTGGAGACTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAATTGACGAAAGAGGGAATTACCACAGTGCAAGAATTTCTCAAATTATCTGTTGTTGACCCTCATAGGCTAAGAAAGATTTTAGGCCTTGGGATGTCAGAGAAAATGTGGGATGTGACAATTAAGCATGCAAAGACTTGTATAATGGGAGACAAACTTTATGTGTACCGTGGGCCTCATTTTACCATATATCTAAATGCAATCTGCCAAATGGTTAAAGCTTTTATCAACGGCCAACCCCTTCTTAATCGAGACCTATCCAACAGGAGTTACATAGAGAAATTGGTGACAGAAGCATATGTTAGATGGGATGACTTGGAAGAAATTGACCAAGTTTTCAGTGATAACGTTGCTCTGTTAACTCAAGGTATGTTATGTTCTATATTACTATGCAAAATTAATTTTTACCAAAGTAAATTGATTTATTTATTGAATGTGACTCTACAGGTGAAACCTTGGACCAATTTCCAAACAACAATCAACTACCATCTGTTATAA 1314 0.3691 MAAKRSFDDSDQDKHKPNDKRMRSSTTRPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRRCCPTRTITRSPSLRLQAMEQASSFEFMFRKKLSLPIFTGSRILDIDGNPIHVILVDKSNGEIVPTSLPQPIKIEIVVLDGDFPPSEKESSWSSEEFNSNIVKERTGKRPLLTGELNITMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAHGTNLNVRIREGITEPFIVKDHRGELYKKHHPPMLKDEVWRLEKIGKDGAFHKKLTKEGITTVQEFLKLSVVDPHRLRKILGLGMSEKMWDVTIKHAKTCIMGDKLYVYRGPHFTIYLNAICQMVKAFINGQPLLNRDLSNRSYIEKLVTEAYVRWDDLEEIDQVFSDNVALLTQGMLCSILLCKINFYQSKLIYLLNVTLQVKPWTNFQTTINYHLL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00251 437 Pfam Calmodulin binding protein C-terminal domain 324 381 IPR046829 -
Car06g00251 437 PANTHER OS02G0177800 PROTEIN 1 395 IPR012416 GO:0005516
Car06g00251 437 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Car06g00251 437 MobiDBLite consensus disorder prediction 1 28 - -
Car06g00251 437 MobiDBLite consensus disorder prediction 1 23 - -
Car06g00251 437 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Car06g00251 437 PANTHER PROTEIN, PUTATIVE-RELATED 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00251 Car-Chr6 2589621 2592480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00251 3 382 Calmodulin-binding Proteins AT5G57580 47.680 4.20e-117 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00251 - - gmx:100802257 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00251 06 2589621 2592480 Car06g00251 06 2589621 2592480 ECH