Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00170 ATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATCAATCAGAAGATGTACAAGGGTCTGCTGCAGAAAGGAACAACAAGTCCAATGATGGTTCATCTTCATCGCCTACTACTCGAAAAAAGCTTTCGAATTGGTTGCATTCAGTTTCTTCTAATAGGCAAAGTCCTTGCAGTCCTCCATCTCCAAGCCTAAGAGGAGAAAGATTGGAGCTTTCTGATTCAGTGAGCTGTGGTGGTGGTGGTTTGGAGATTGTTTCTGATTCAGCGAATCGTGATTCGGGGTCTAGCACTTCGAGGGATCCTGAAGTGGAAGAAGAATATCAGATTCAACTTGCTTTAGAGCTTAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATAAGTTTGGGATCTTGTGATCCTGATAATACACCAGCTGAAGTTGTGGCATACAGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGATGGTTTCTATGATCTGTATGGTGTCTTAACCGAGTCGATGTCTTCAAGAATGCCTTCTCTGGTAGATCTGCAAGGAACACCGACCTCAAATTATATAAAATGGGAAGCAGTCTTGGTCAATAGGATTCTTGATTCCAATTTGTCGAAACTTGAGCAAAAGGCCCTGGAGCTGGCAGTAAAGTCAAGGGAAGATTCTGAAATAGTTGTAGACAGAAACTTGGTGCACAAGATTGCAATATTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTATAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCTCTTGGATCACTCACTATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTGTTATCTGATAGTTTGGGCATCCCATGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCCGATGATGTGGCAATGAACTTTGTCAAGATGGATGAGGGAAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGGACACTTATTCCGTCTGATGCAACTGGATCACATATCGAGTACGATGATTCTTCTTTTGTAGCCAGTCCTTCATCAAGAGACTTTGATTCATCTCACATTGCATCGTTCAGCAGCGGCGTTGGAAGTTCATCCGAAGGAACTTCAGAGGAATCTGTTAGCAGACCTAATAATTATCCATACACGCATGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCTGCAGCACACAGAATGAAAGTCAAAGATGTTTCTCAATATATGATTGATGCTGCCAAGGAGAATCCTAACTTGGCTCAAAAACTTCATGATGTTCTACTTGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATCTATCATGATCAGTTAGGTTCCCAAACTGAGGCCAATTCTTCAACTGAAGAAAAGGATGAATATAAACAGCCAAGTCTGCAACAAGAAGCTAAGGTTGGTGATTATCTCAGTCCTCCTCGTTTTTTGCCTCCATTGCCTCCTCAAAGAACGCATACCAAAGCAAGTTCTAGCAGTCAGATTGAGCATTCTAAGCCCGTAGAAAGTTTGGGAATTGGCCCATCTCCTGATACAAGGGAAGCTTCTGGATATCACATACAATCCGAAGCAGAAGCAACTCAGGTAAAGTACGGGAAAAATGTACCGgtggctgctgctgcagctgccgcggctgctgttgttgcatcttctatggtagttgctgtggcaaagtcaagcactgactcaaatattgagattcctgtagcggcagctgctgcagctgttgtagcaaccactgctgccgtCAGTAAACAGTATGAGCAGGGAAGTCGAAGTGATGGAGATACTGAGGGTGCTAGTTGTGAGCCAAAAGGTAGTGGTGACGGAGAGAATAATGCTTCAGAAGGAGAGCAAAAATCTGATAGATCGGTAAGTAATGATAGCACAAAATCTGATTCTGCACTAGATGATGTTGCTGAATATGACATTCCATGGGAGGAAATCGCGATGGGTGAACGTATCGGACTTGGATCATATGGAGAAGTGTATCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTGCATCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAAAGTGAGATCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGCGATTTCGGTTTATCTCGAATGAAGTACAGCACATTCCTTTCTTCTAGATCAACTGCGGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTCTTTAGCTATGGGGTGATATTATGGGAGCTCTCTACTCTTCGGCAACCGTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTCGGTTTCCAGCATCGCCGTCTTGATATTCCAGATAATGTTGACCCTGCCATTGCAAATATTATTCGACAGTGTTGGCAGACAGATCCTAAGTTGAGACCTACTTTTGCTGAAATAATGGCGGCACTGAAGCCATTGCAGAAGCCAATTACCAGTTCTCAAGTGCACCGTGCAAGTGCTCAATCATCACGACATGCTGAAGATCCAGCAGCATAG 2886 0.4082 MKNILKKLHIMSNQSEDVQGSAAERNNKSNDGSSSSPTTRKKLSNWLHSVSSNRQSPCSPPSPSLRGERLELSDSVSCGGGGLEIVSDSANRDSGSSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTESMSSRMPSLVDLQGTPTSNYIKWEAVLVNRILDSNLSKLEQKALELAVKSREDSEIVVDRNLVHKIAILVAEYMGGSVEDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSLGIPCRLVKGMQYTGSDDVAMNFVKMDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFVASPSSRDFDSSHIASFSSGVGSSSEGTSEESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHDQLGSQTEANSSTEEKDEYKQPSLQQEAKVGDYLSPPRFLPPLPPQRTHTKASSSSQIEHSKPVESLGIGPSPDTREASGYHIQSEAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNIEIPVAAAAAAVVATTAAVSKQYEQGSRSDGDTEGASCEPKGSGDGENNASEGEQKSDRSVSNDSTKSDSALDDVAEYDIPWEEIAMGERIGLGSYGEVYRGEWHGTEVAVKRFLHQDISGESLEEFKSEIQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIANIIRQCWQTDPKLRPTFAEIMAALKPLQKPITSSQVHRASAQSSRHAEDPAA 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00170 961 MobiDBLite consensus disorder prediction 474 493 - -
Car06g00170 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Car06g00170 961 CDD STKc_MAP3K-like 687 933 - -
Car06g00170 961 Pfam Ethylene-responsive protein kinase Le-CTR1 145 348 - -
Car06g00170 961 MobiDBLite consensus disorder prediction 1 68 - -
Car06g00170 961 MobiDBLite consensus disorder prediction 8 62 - -
Car06g00170 961 SMART serkin_6 681 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00170 961 ProSiteProfiles Protein kinase domain profile. 681 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00170 961 Gene3D Phosphorylase Kinase; domain 1 674 758 - -
Car06g00170 961 MobiDBLite consensus disorder prediction 83 106 - -
Car06g00170 961 Pfam Protein tyrosine and serine/threonine kinase 682 933 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 MobiDBLite consensus disorder prediction 516 531 - -
Car06g00170 961 MobiDBLite consensus disorder prediction 502 548 - -
Car06g00170 961 Gene3D Transferase(Phosphotransferase) domain 1 760 946 - -
Car06g00170 961 PRINTS Tyrosine kinase catalytic domain signature 755 768 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 PRINTS Tyrosine kinase catalytic domain signature 794 812 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 PRINTS Tyrosine kinase catalytic domain signature 904 926 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 PRINTS Tyrosine kinase catalytic domain signature 841 851 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 PRINTS Tyrosine kinase catalytic domain signature 860 882 IPR001245 GO:0004672|GO:0006468
Car06g00170 961 MobiDBLite consensus disorder prediction 618 668 - -
Car06g00170 961 SUPERFAMILY Protein kinase-like (PK-like) 664 932 IPR011009 -
Car06g00170 961 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 956 - -
Car06g00170 961 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 956 - -
Car06g00170 961 MobiDBLite consensus disorder prediction 381 417 - -
Car06g00170 961 ProSitePatterns Protein kinases ATP-binding region signature. 687 708 IPR017441 GO:0005524
Car06g00170 961 MobiDBLite consensus disorder prediction 940 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00170 Car-Chr6 1933988 1941750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00170 1 953 MAP Kinase Kinase Kinase AT1G73660 60.411 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Car06g00170 PK_Tyr_Ser-Thr 5.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00170 - - gmx:100778331 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00170 06 1933988 1941750 Car06g00170 06 1933988 1941750 ECH