Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00162 ATGTGGATGGTTGGTTACAATGAAGGTAGTGACTTCAACGTCGCTGCAGATTATCCATTCAATGGAAGAAAACTCAGACCTATCATTCCAAGACCAGTCACTAGTACTACTCCTCCCAACAACACTTCAACAACTCCTTGCTTAAACCGCAATATTCATGCCAATGATTTCTTTTCACAATATCACAATCTCCAGGcagcagcagcagcagcatcagtaggagatcagagcaAGAGAACAGAGTTGAATAATTCAGCGGTAGTGGTGAGTTCAAGGTGGAATCCAACACCAGAACAGTTAAGAGCACTGGAAGAATTGTATAGAAGAGGAACAAGAACACCATCTGCAGAACAAATCCAACAAATAACAGCACAGCTTAGAAGGTTTGGAAAAATTGAAGGCAAAAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAGAGACAGAAACGCCGCCGTCAAATGGAATCATCAGCTGCTGATCAGTTTGATGCTACTACTAGTCTTGTTGAAAAGAAAGACTTAGGCTCAAGTAGGACGGTGTTTGAAGTTGAACAGACCAAGAACAACTGGCTACCCTCTACAAACTCCACTACTAGTACCCTTGCAGAGGAATCTGTTTCAATTCAAAGAGCAGTAGCAGCAGGAAAAGCAGATCAGTGTAGAACAGATGGATGGGTCCAATTCGATGAATTAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCACATGATGCAGTTCACTTGTCCTCATCCTACTACCCTCCTTATTCCTAATAATTCTTCTAATTACACCTCCTCTATCACTACTACTACCCCCACGGCCACCTTAACAACTACTCTAATGGACCCAAAACATGATCTTAGCTTATTCATTTCACCTCACACACACTCACAAAGACAAAATGGTTTCCACAACAATATTACTCACAATGATGATCATTGTGTGGAATCTCAAACCCTTCAACTTTTCCCTATTAGGAATGGAGATGGATGCAGTGACATTATTAACCATCACAAAGAGACAGAGATATCAGCTTCAGCAATGAATGCACCTAGCCACTTTATTGAGTTTCTTCCGTTGAAGAACTGA 1110 0.3928 MWMVGYNEGSDFNVAADYPFNGRKLRPIIPRPVTSTTPPNNTSTTPCLNRNIHANDFFSQYHNLQAAAAAASVGDQSKRTELNNSAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSAADQFDATTSLVEKKDLGSSRTVFEVEQTKNNWLPSTNSTTSTLAEESVSIQRAVAAGKADQCRTDGWVQFDELELQQRRNFMERNATWHMMQFTCPHPTTLLIPNNSSNYTSSITTTTPTATLTTTLMDPKHDLSLFISPHTHSQRQNGFHNNITHNDDHCVESQTLQLFPIRNGDGCSDIINHHKETEISASAMNAPSHFIEFLPLKN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00162 369 ProSiteProfiles 'Homeobox' domain profile. 96 151 IPR001356 GO:0003677
Car06g00162 369 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 53 369 IPR044555 GO:0003700|GO:0099402
Car06g00162 369 Gene3D - 89 151 - -
Car06g00162 369 SMART HOX_1 88 155 IPR001356 GO:0003677
Car06g00162 369 Pfam Homeodomain 91 150 IPR001356 GO:0003677
Car06g00162 369 PANTHER WUSCHEL, PUTATIVE-RELATED 53 369 - -
Car06g00162 369 CDD homeodomain 92 152 IPR001356 GO:0003677
Car06g00162 369 SUPERFAMILY Homeodomain-like 91 156 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00162 Car-Chr6 1870657 1873115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00162 1 369 Wox Gene Family AT3G18010 37.317 1.58e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car06g00162 Homeodomain 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00162 - - gmx:100777274 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00162 06 1870657 1873115 Car06g00162 06 1870657 1873115 ECH