Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00146 ATGGCGAGGCTAGATAGGACAGGCACAAATAAAAGCTTAGAGAGTCTAATGGACTCTCACAAACCAGGAACCACAACAAATGTGAACCAACTGAGGCCTCAGAAGTCCATTCCTGGTTACGGCCTAGAATTCAATAACCTCTCATACAGTATCATAAAGAAGCAGAAAAAGGACGGAGTTTGGATCAAGAAAGAAGCATATCTTCTTCATGATATCTCTGGCCAGGCAATAAAAGGTGAAATCATGGCAATCATGGGTCCTAGTGGTGCTGGAAAATCTACCTTTCTTGATGCTTTGGCCGGACGAATTGCAAAAGGGAGTCTTCAAGGATCAGTTAGAATTGATGGAAAGCCAGTAACTACAAGCTACATGAAAATGGTGTCATCATATGTTATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCAGAAGTTAGGCTTCCTCCTTCGATTTCCAGGGATGAAAAAAAGAAGAGGGTTTATGAGCTCCTCGATAAACTCGGCTTGCAGAGTGCTACACATACCTATATTGGTGACGAGGGAAGGAGAGGAGTTTCGGGAGGGGAACGACGAAGGGTTTCTATCGGCATAGAGATCATTCATAAGCCATCGCTTCTGTTTCTGGACGAACCTACCTCGGGACTTGATTCTACTAGTGCTTACAGTGTAGTGGAAAAGATTAAAGACATAGCTCAGGGTGGTAGCGTTGTCCTCATGACCATACATCAGCCTTCATATAGAATTCAAATGCTCCTTGACAAGATAGCTGTCCTGGCGAGGGGAAGACTGGTATACATGGGAAGGCCAGATGCACTTGACACTCACCTTTCCGGATTTGGAAGGCCTGTACCTGATGGTGAAAGCAGTATTGAGTATCTCCTAGATGTTATAACTGAATATGATCAAGCAACGGTTGGACTCGACCCTCTGGTCCAATACCAACGTGATGGCCATAAACCTGACCCAGCAACCATGACACCTATTCCAAAAACTCCAAGAACACCTTATAGAAGGAACACCCCAGCATCTAAACACATGATTAGCCTGCGCAGCCAAGGATTTGCTGCTGGTACACCGCAACCTGATTCTGCACAGTTTGGTCTTGAGGATGACGACGACGATGATGAGAACTTTGATAACTCCCTTGGAAGGAGAAGTGTACAAACATCAAGGAACATTGGGACCAGTGGTGTTTATCCACGTTTAGCTTCTCAGTTCTACCAAGATTTCTCAGCCAAAGATTTCTCTGTTTGGATTTACAATGGTGTAGTAGGAACCCCACGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGGAAAACACCCTTGTCAGGACCAAGAAGTTATGTTTCCAACCAACATTCTGCAACTTATCAGGATCATTATCTCCAAAAAATTCCTACGGCGGTTAGCCAGTCTATGGACTACTCTGCAACTCCATATGCACCCTCTTCATATGAAGAGCTTGAGATTGAGGAAGCGCTTGATGAGCCAAACCTTGGACCTAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGTACTTAATGTAATTCGCACTCCAGAACTTTTCGCCTCCCGTGAGATTGTGCTGACTGTTATGGCACTGGTCTTATCCACCATTTTCAATAATCTGGGTGATACTACATTCAAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTCTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTTCCATCTTTTATCATGGAAAGGTTCATCTTCATCAGGGAAACATCCCACAATGCTTATCGTGCTTCCTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCTGTTCAAGGCCTCACATTTGCTGTCATAACCAAATTAATGCTCCACTTGAAAAGCAATCTCTTCAATTTTTGGATGATACTATTTGCCTCCCTCATTACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTACCTAGTTACATCACAGGCTATGCAGTAGTCATTGCCACAACAGCACTCTTCTTTTTGACCTGCGGCTTCTTCCTCAAGCGAACTCAAATACCCGTATACTGGAAGTGGCTCCATTATATTTCAGCAATCAAATACCCATTTGAGGGATTGCTAATAAATGAATTCAAGAACGATCGCGGCTGCTACACTGGAAACAAAGCAGATTTATCCCCCGGACCTTTAGGAGACGTGAAACCCAGCAAACAACACAATGTCAGTCTGCCCCTTAACTGCTTATTAGGAGAAGATGTTTTGTCCACAATGGATATTACAATGGAAAGCCTGTGGTATGACATCTTAATCCTGCTAGCTTGGGGTGTTCTTTACAGAAAGCTGGATCGAACTCCCAACACTCCTCAGCAGATAAAGAGTGGTAATAAAATAAAGCTGCCCTATCAATTACCAATTTCGCATCCTGAAGTCACATACGAGAATGAAGCTTCAGAAGAACAAGACCCTCACATGAAAAAACATATAAAATAA 2550 0.4341 MARLDRTGTNKSLESLMDSHKPGTTTNVNQLRPQKSIPGYGLEFNNLSYSIIKKQKKDGVWIKKEAYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVYELLDKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSVVLMTIHQPSYRIQMLLDKIAVLARGRLVYMGRPDALDTHLSGFGRPVPDGESSIEYLLDVITEYDQATVGLDPLVQYQRDGHKPDPATMTPIPKTPRTPYRRNTPASKHMISLRSQGFAAGTPQPDSAQFGLEDDDDDDENFDNSLGRRSVQTSRNIGTSGVYPRLASQFYQDFSAKDFSVWIYNGVVGTPRRQPSWTPARTPGWTPGKTPLSGPRSYVSNQHSATYQDHYLQKIPTAVSQSMDYSATPYAPSSYEELEIEEALDEPNLGPKYANPWLREVAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFNNLGDTTFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAVITKLMLHLKSNLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPVYWKWLHYISAIKYPFEGLLINEFKNDRGCYTGNKADLSPGPLGDVKPSKQHNVSLPLNCLLGEDVLSTMDITMESLWYDILILLAWGVLYRKLDRTPNTPQQIKSGNKIKLPYQLPISHPEVTYENEASEEQDPHMKKHIK 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00146 849 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 801 - -
Car06g00146 849 PANTHER ABC TRANSPORTER 3 801 - -
Car06g00146 849 MobiDBLite consensus disorder prediction 362 390 - -
Car06g00146 849 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Car06g00146 849 MobiDBLite consensus disorder prediction 8 32 - -
Car06g00146 849 Pfam ABC-2 type transporter 525 731 IPR013525 GO:0016020|GO:0140359
Car06g00146 849 CDD ABCG_EPDR 42 275 - -
Car06g00146 849 SMART AAA_5 78 278 IPR003593 -
Car06g00146 849 MobiDBLite consensus disorder prediction 321 348 - -
Car06g00146 849 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Car06g00146 849 Gene3D - 41 286 IPR027417 -
Car06g00146 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 283 IPR027417 -
Car06g00146 849 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Car06g00146 849 MobiDBLite consensus disorder prediction 1 32 - -
Car06g00146 849 MobiDBLite consensus disorder prediction 438 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00146 Car-Chr6 1761434 1764911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00146 20 280 Calmodulin-binding Proteins AT2G36910 24.242 1.23e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00146 K05681 - gmx:100819497 1295.8