Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00144 ATGGGAATGCTATCTCACAGACACACAGCTATGTCAATGGCGATGCTGTTGCTTCTTCTAGTCGTAAGATTATCAGTAGCAGCAGCAGATCTCGATTCCCAGCGAGCTGCATTGCTAGCTCTCCGTTCTTCAGTTGGCGGTCGAACCCGTTTTTGGAACGCAACCAATCAGACTCCCTGCAATTGGGCCGGCGTCCAATGCGACCAAGACCATGTCGTCGAGCTCCACCTTCCCGGCGTCGCTCTTTCCGGCCAATTACCGAACGGTATATTCGGCAATCTGACCCACCTCCGCACACTCAGCCTCCGTTTCAACGCTCTCACCGGTTCACTCCCTTCAGATCTGGCATCATGTGTCAACCTCAGGAACCTCTACCTTCAGCGGAACCTTCTCTCCGGCGAAATCCCTCAGTTCCTGTTCAGTTTGCCGGACTTGGTTCGACTCAACATGGGTTACAATAACTTCTCGGGTCCTATTTCAACCTCATTCAACAACTTCACAAGACTCAAAACTCTCTTCCTTGAAAACAACAAGCTTTCAGGTTCCATCCCAGAATTGAACCGCCTGAGTCTGGATCAGTTCAATGTTTCCAACAATTTGCTAAACGGCTCTGTTCCCGTCAAGCTTCAGACGTTTTCTCAAGATTCATTTCTGGGAAATTCCCTCTGTGGTCGACCCTTTTCTCTATGCTCTGGGACCGATTCTCCTTCTTCTTCCCCTTTCCCTATCCCCGACGGTAACGGcaccaagaacaacaacaaccacaacaacaaGTTGTCCGGCGGAGCTATTGCCGGAATCGTAATTGGATCCGTGGTGTTTCTTCTTTTGGTCGTTTTCCTCTTGATCTTCTTGTGCAGGAACAAGAGTAGCAAAAAGACCAGTGCTGTTAATGTTGCAACTGTGAAGCATCCTGAATCTGAAGTTCCTCATGAGAAATCTATTTCCGACATGGAGAACGGCAATGGATACTcttctgctgctgctgctgctgccgcggccgcagttgcAGTGAACAAGGTTGAAGCAAATGGCAATGGCAACGGTGGTGTTGGTGGAGTGAAGAAGTTGGTATTTTTTGGGAATGCGGCTAGAGCTTTTGATCTAGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGTAAAGGTACTTTCGGGACAGCTTATAAGGCAGTTttggagtcagggcctgtggtggcagtgaaaaggttgaaggatgtgacaattactgagaaggaattCAGGGAGAAGATTGAAGCGGTTGGAGCAATAGATCATCAGAGTTTGGTACCTCTAAGGGCTTACTATTTCAGCAGAGATGAAAAGCTTCTTGTTTATGATTACATGTCAATGGGAAGCCTCTCTGCACTTTTGCATGGAAACAAAGGAGCGGGTAGGACACCACTGAATTGGGAAATGAGATCCGGGATTGCACTAGGAGCAGCCCGTGGCATTGACTACCTTCATTCACAAGGGCCTAATGTCTCCCATGGAAATATAAAGTCTTCTAATATTCTCTTAACAAAATCATATGAGGCTAGAGTATCTGATTTTGGGCTAGCACAGCTTGTTGGCCCCTCCTCTACCCCAAACCGTGTTGCCGGTTACCGTGCGCCAGAAGTAACTGATCCTCGCAGAGTGTCTCAAAAGGCAGATGTGTACAGTTTTGGTGTATTGCTGTTGGAACTTCTGACTGGGAAGGCACCTACACATGCTCTCCTCAATGAGGAAGGGGTGGACCTTCCAAGATGGGTCCAGTCAGTGGTTAGAGAAGAGTGGACTTCCGAGGTATTTGATCTTGAGCTCCTTAGGTATCAGAATGTTGAAGAGGAGATGGTTCAGTTGCTTCAACTTGCTGTTGATTGTGCAGCACCATACCCTGATAAGCGACCTTCAATGTCTGATGTGGTACGGAACATAGAAGAGTTACGTCACTCTAGCTTGAAAGAGGATCAAGACCAAATCCAACATGACAACAATGATTTAGAATTATAG 1995 0.4426 MGMLSHRHTAMSMAMLLLLLVVRLSVAAADLDSQRAALLALRSSVGGRTRFWNATNQTPCNWAGVQCDQDHVVELHLPGVALSGQLPNGIFGNLTHLRTLSLRFNALTGSLPSDLASCVNLRNLYLQRNLLSGEIPQFLFSLPDLVRLNMGYNNFSGPISTSFNNFTRLKTLFLENNKLSGSIPELNRLSLDQFNVSNNLLNGSVPVKLQTFSQDSFLGNSLCGRPFSLCSGTDSPSSSPFPIPDGNGTKNNNNHNNKLSGGAIAGIVIGSVVFLLLVVFLLIFLCRNKSSKKTSAVNVATVKHPESEVPHEKSISDMENGNGYSSAAAAAAAAAVAVNKVEANGNGNGGVGGVKKLVFFGNAARAFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTITEKEFREKIEAVGAIDHQSLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEMRSGIALGAARGIDYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGLAQLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSDVVRNIEELRHSSLKEDQDQIQHDNNDLEL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00144 664 Gene3D Ribonuclease Inhibitor 144 230 IPR032675 -
Car06g00144 664 CDD STKc_IRAK 380 643 - -
Car06g00144 664 Gene3D Transferase(Phosphotransferase) domain 1 449 663 - -
Car06g00144 664 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 658 - -
Car06g00144 664 Gene3D Ribonuclease Inhibitor 32 142 IPR032675 -
Car06g00144 664 ProSiteProfiles Leucine-rich repeat profile. 168 190 IPR001611 GO:0005515
Car06g00144 664 Pfam Protein kinase domain 377 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00144 664 SUPERFAMILY L domain-like 47 210 - -
Car06g00144 664 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Car06g00144 664 Gene3D Phosphorylase Kinase; domain 1 352 448 - -
Car06g00144 664 SUPERFAMILY Protein kinase-like (PK-like) 378 639 IPR011009 -
Car06g00144 664 PANTHER OS05G0588300 PROTEIN 3 658 - -
Car06g00144 664 Pfam Leucine rich repeat 85 131 IPR001611 GO:0005515
Car06g00144 664 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Car06g00144 664 ProSiteProfiles Protein kinase domain profile. 374 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00144 Car-Chr6 1753651 1756824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00144 30 644 Receptor kinase-like Gene Family AT1G48480 64.103 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car06g00144 Pkinase 5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00144 - - gmx:100818955 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00144 06 1753651 1756824 Car06g00144 06 1753651 1756824 ECH
Car06g00144 06 1753651 1756824 Car08g01610 08 25624842 25628255 PCT