LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g00133	ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTTGATGATCTGCGACTGAGGAAAGAACGAATGactgctactgctactgctactgctactgcATCTCATTCTCACAGCTCAAACCAATCCCACCATTTGCCTATAGATGCATATGCTTACACCAAGCAAACCTACAGAGGGTCGAGAAATACAAAAGCAAATGAAATTGTTAGTTCCGGAAGTGGGGAGATGCTGAATAGGTCTAGCAGAAGGCAGAGATCAGTAAAGAGTGGAGAGTTGTCAAATCAGATCATTCCTTACGGGAAAGCCTTTGAGAATGGAGGGAAACTAAGAAGGGCCGATTTGTCTTTCACTAATTCAATTTTGGGTTTCCTTCAGAAAATTCAAAGGGGAACAATGGATCGAGGAAGCAATTTGGACAGGCAACTAGCTTCTACTAGTCACACCCTCTCTCTTGTGCAGATAAATGAGATCTCCAAAGGTGCACAAAAACTCAACCACATATTGAGAGCCTGCTGCTCCAATGGAGTTAACATGGATACATATTCATTAAATTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCCCTTGGGATGCTAGTAGAGCTGCAGAAAAGTTCAGAGTTTATGATTACCTCACAAACGCAAAACAAAAATCGAATCACGCTATTAgaggaggaggaggaggatgatgacgaagaggataagaggaggatggagAAAATGCAGCTGGTGCGTCCAACTTTCTTGTTTGACAACAAGATGCTGAGAACAATTACTATCACCAAGTCTAAGGAAGCCAAAAAGATCAAAGTTTCTCAGCAGAAGGGAATACCAACTAACAATAGCGAAGCTGTTGCCGACATTTCAAACCAGATGGGCGACAAGGGAAGGATTCCAAACGTAATAGCCAAACTAATGGGGCTAGACAACCTTCCTGAGAAAAAAGATTCACGTAATAGTAATACTGCATCATCCAAGCACTCAAGCAGCACTACACTGAAGAGCAAACAAACTGACAATTTGATCAAAAACCAAAAAGTGGTTGTAGGATCTTTCAAAAACCTAATGTTTGGTGGCGCGGATAAAAATTTAGTCCTTCAAAACCAAAAGACTATCTCTGAGTCTGAGGTGGTTGGTATAAAATCATTGAAGGGCTTTGACAAAGCCAGCATCATCAACGGTTCTGCTCAAAAGAACCTTGTTAGGGAAAGTCAAAATTATGTTGAGGTGGTGATGGGAAGGAAACAGGATCGCCCAAATAACAGTGGCACGTCTAAGGGCAGAACCACCAGCAATGGCAATGATCCTGTTCGAAATCTGCACGAAAGAAGATCACAAGTTAAATCTGCCAATCAGGTTGCAAATGCAAGTATTATTCAACCGGAAAAAAGACATGCAATTACAAACAAGCACATGCAGATGGGCAATGAAAACAAGTCTCGGGACCATCTGGGAGTTCAAAAGTCAAACTCATACTACATACTGTCTAAAGGTAGAGGGAGAGAAATGACAATCGAGAATTCATCCAAACAATCCACCAATAATCCTCAAAAGAAGAAGAAGAAAAAACAGTCATCCATAAACCAACCCACACCGTTCAAAAAATCATGTGGTAACCATGATCTAGTGGAATCCAATGAGAAAGTAAACGAAATTATTAATAGAAAGTCCTCTCCAAGATATGAAGATTTTGAACGGAGGCAAACAGTACTCAAGGATCATAAACTGGCCTCCAGCAAGAAAATAAAACCTGAACAAATGCTGAGAGGAAGAAATGGACAAGGCAAATTTCAAGAAGCGAGTGATAGAGCATCTGGTGGCAAGTTCAAAGTCTTCAACGGAGCAGAGCGAAAAAGGGCTAGTATGTTCATAGAAGCCGAACAACTGCTTCCTACTACGTTATACAATTCTGGCAGTGGTGGAGATTTACAAGAATCACCCAATGACTTGCAATACGAAGCTGTTCCTGGGTCGCCACATGAGGGATTGAAGACAAGTGAAGTTGCTTTACATAAAATTAAAACAAATGGGGGAATTCAGGAATACGGAATGGGTGTGAAATTAGAAGATCAAAATATTTGTGAAAAACAACCATTATTAACAGAAAGTGGAAACCGCCTCAAGTTGATTTTGGTAATGAGCCAATTATTCGTCAACACTGCAGAAGCCCTTTTCAGACTCAACATTCCGTTTGGTATTCTTCAAGGTGGTCGTCAAGATCAAGGTAGCAAACTTATACTAGATTGCGGCTATGAAGTGATGAAAAGAAAAGGGATACGGCAGGAACTCAAAGTTCATACTTGCTCAAAGATATCATCAATCACGAGTACTGCTAATATTATAAGATCCCTAGATGACTTGGTTAGGCAGCTGAGTGAAGACATGGACAAGCTTAAATTATACGGAAGGAAAAACAGTAGCCAAGTTGATGTTGAGGAGATGATTCAACGTGATGTGTATCATAAATATCCAGACATAGACTGCATGTGGGATTTGGGTTGGAATGATGACACACTTGCATTTATCGAAAAATATGATGTTATAAGGGATATAGAAAAGCATATCATTAGTGTACTACTAGATGAGATCACCAAAGATTATTGCATGTTCAAAGAGAATTGA	2631	0.3869	MAKRSDFAQKLLDDLRLRKERMTATATATATASHSHSSNQSHHLPIDAYAYTKQTYRGSRNTKANEIVSSGSGEMLNRSSRRQRSVKSGELSNQIIPYGKAFENGGKLRRADLSFTNSILGFLQKIQRGTMDRGSNLDRQLASTSHTLSLVQINEISKGAQKLNHILRACCSNGVNMDTYSLNFAKELLQGAIDLEESLGMLVELQKSSEFMITSQTQNKNRITLLEEEEEDDDEEDKRRMEKMQLVRPTFLFDNKMLRTITITKSKEAKKIKVSQQKGIPTNNSEAVADISNQMGDKGRIPNVIAKLMGLDNLPEKKDSRNSNTASSKHSSSTTLKSKQTDNLIKNQKVVVGSFKNLMFGGADKNLVLQNQKTISESEVVGIKSLKGFDKASIINGSAQKNLVRESQNYVEVVMGRKQDRPNNSGTSKGRTTSNGNDPVRNLHERRSQVKSANQVANASIIQPEKRHAITNKHMQMGNENKSRDHLGVQKSNSYYILSKGRGREMTIENSSKQSTNNPQKKKKKKQSSINQPTPFKKSCGNHDLVESNEKVNEIINRKSSPRYEDFERRQTVLKDHKLASSKKIKPEQMLRGRNGQGKFQEASDRASGGKFKVFNGAERKRASMFIEAEQLLPTTLYNSGSGGDLQESPNDLQYEAVPGSPHEGLKTSEVALHKIKTNGGIQEYGMGVKLEDQNICEKQPLLTESGNRLKLILVMSQLFVNTAEALFRLNIPFGILQGGRQDQGSKLILDCGYEVMKRKGIRQELKVHTCSKISSITSTANIIRSLDDLVRQLSEDMDKLKLYGRKNSSQVDVEEMIQRDVYHKYPDIDCMWDLGWNDDTLAFIEKYDVIRDIEKHIISVLLDEITKDYCMFKEN	876

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g00133	876	MobiDBLite	consensus disorder prediction	68	89	-	-
	Car06g00133	876	PANTHER	EXPRESSED PROTEIN	663	871	-	-
	Car06g00133	876	PANTHER	EXPRESSED PROTEIN	1	589	-	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	325	340	-	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	447	466	-	-
	Car06g00133	876	Pfam	DUF761-associated sequence motif	300	319	IPR032795	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	312	340	-	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	415	441	-	-
	Car06g00133	876	PANTHER	OS01G0228800 PROTEIN-RELATED	663	871	-	-
	Car06g00133	876	PANTHER	OS01G0228800 PROTEIN-RELATED	1	589	-	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	501	543	-	-
	Car06g00133	876	MobiDBLite	consensus disorder prediction	420	439	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g00133	703	869	TRM (TON1 Recruiting Motif) Superfamily	AT5G42710	47.399	5.43e-38	150

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g00133	-		-	mtr:MTR_8g107730	1074.69