Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00132 ATGAATGGGAAAGCCTCCGTCTCTAAGGAGCTCAATGCCAAGCACATCAAGATCTTGGAGGGACTTCTAAAGCTGCCTGAAAACAGGGAATGTGCAGATTGCCGGAACAAGGCTCCACGATGGGCAAGTGTGAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGGATTCACAGAAGCCTTGGAGTGCACATATCAAAGGTGCGGTCCACCACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTCATGCAGTTTATGGGTAACGAGAAGTCGAATAAGCACTGGGAGGCAGATATGGCGCCCAATTTTGACAGAAGTAGATTGCTAATTGAGAAGTTTATCCTAGCAAAGTATGTGGAGAAAAGGTGGGCTTCAAAAGATAAACTACAATCAACTTCGAAGTCAGTATGCAACTTCAATGAGTTGGCAGCAGATGGTATTCCGAAGAATAGTAGGAGACTTTCTCTGGAAGAAACCATTCTTGCAAACCACATGGCACAAGTTCTGCCGCCTGTAACAAGATCCCGCCAGGGCTCTTTGGACATGCAAAAGAAGAGTTCACCTCCATTAAAGAGACCGTTCTCATCGGTTGATTTTGACAAGTTCCCAGGAAAGAGCATTATTAGTGCTGATTTTTTCAGTTTGCTTTGCATCCAGGACAATAAACAGAACTTCTCAACTGTACCTCCTTCAAGCTGGGCAACATTTGATTGA 717 0.4421 MNGKASVSKELNAKHIKILEGLLKLPENRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQFMGNEKSNKHWEADMAPNFDRSRLLIEKFILAKYVEKRWASKDKLQSTSKSVCNFNELAADGIPKNSRRLSLEETILANHMAQVLPPVTRSRQGSLDMQKKSSPPLKRPFSSVDFDKFPGKSIISADFFSLLCIQDNKQNFSTVPPSSWATFD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00132 238 Pfam Putative GTPase activating protein for Arf 18 127 IPR001164 GO:0005096
Car06g00132 238 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Car06g00132 238 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Car06g00132 238 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Car06g00132 238 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Car06g00132 238 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 238 IPR044520 GO:0005096
Car06g00132 238 CDD ArfGap 19 119 - -
Car06g00132 238 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Car06g00132 238 SUPERFAMILY ArfGap/RecO-like zinc finger 17 126 IPR037278 -
Car06g00132 238 SMART arf_gap_3 13 130 IPR001164 GO:0005096
Car06g00132 238 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00132 Car-Chr6 1643199 1657763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00132 19 124 C2H2 Transcription Factor Family AT3G07940 45.536 9.15e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00132 K12486 - gmx:100803735 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00132 06 1643199 1657763 Car08g01547 08 24555249 24559338 PCT