Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00130 ATGAGGTGGTGCAGTGAGGCTATCTCAGTGTCGGGTGCACATGCTCTCGCTCCTGCATCCTTACTCTGCAACACAAGTTCGGTGTTTCAATTCCAAAAGTCTTTCTTGAAATTAAAATTCAATAACACCTTTTCTTCTAGCTCTCTCACCCATCGGAAGCCGTTGGCTGCTCAAGCACAAGCGTCAATTCCAAGGGATGATTTTGATTTTGTGGTCGTTAATTTCTACCATTTTGTGTTCATCAAAGACCCACAAGAAGAAGTCGCCAAACACCTCTCTTTCTTGGAATTGGAGGGGCTAGACATCCATGGAAGAGTCTATTTGAATGAACAAGGGATCAATGCGCAGTATAGTGGGCCATCAAAAGATGCTCTGGCGTATGTCAACTGGATAAAAGAGGACGACAGGTTTTCTTCCATCCTGATTCAGATATCTCCATCAGAAATTGGACATGCCTTTCCAACATTGAAGTTGCGGTATAAGCCTTCATTAGTACAGGCAAGTCGCATATCGCATCTTCCATTGCTCGATCCTTCAATGCGAGCATTGCCTTTAACACCTTCAGAATGGAGAGATAGATTAGAAGCTATCAATAAAAATGATCTGCAATCAAAAGATTATCCTAACAGGAATTACATTCTATTGGATGTGAGAAATGGATATGAGTGGGACATTGGACATTTTCGTGGAGCTCAACGGCCTAATGTGGACTGCTTTAGGAGCACTTCATTTGGACTGTCTCAGGGAGAGACGACTTCTTCAGATCCTTTATCAAATGTTGATAAAGAAAATGCAAACATATTGATGTATTGTACAGGAGGGATTCGCTGTGATGTGTATTCTACAATACTAAGGCAGCATGGATTTCAGAATTTGTATACCTTGAAGGGAGGTGTTTCTCACTATATAAAGAATGAAGGTCCTGCAGAATGGGTTGGAAATTTATTTGTATTTGACTCTCGATTGTCTCTTCCTCCTCCTGTTTACTATCCTCAGGCCACAGCTGAAGGTGGGACGACTCTGGTTTCTGGAGATGGTAAGTTCGCAAAATGCTACACATGTAATGCGGGAGTCAGTGAACTGAGACATCGGAATTGTGCGAATCTTGACTGTAATTTGCTTTTTCTATGCTGCAGAAAATGTGTAAAAGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTACTCGACTTAGACCTATTTTAAATGGGGACCAGAGATACAGAAAATGGCACACCTATCGTGACTTGGATTTGCAAGGCAACATAAAAATTTCAACTTCATCGCCCGTATTAACGACACCACAAATTCATCTTAAATAA 1326 0.4133 MRWCSEAISVSGAHALAPASLLCNTSSVFQFQKSFLKLKFNNTFSSSSLTHRKPLAAQAQASIPRDDFDFVVVNFYHFVFIKDPQEEVAKHLSFLELEGLDIHGRVYLNEQGINAQYSGPSKDALAYVNWIKEDDRFSSILIQISPSEIGHAFPTLKLRYKPSLVQASRISHLPLLDPSMRALPLTPSEWRDRLEAINKNDLQSKDYPNRNYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQGETTSSDPLSNVDKENANILMYCTGGIRCDVYSTILRQHGFQNLYTLKGGVSHYIKNEGPAEWVGNLFVFDSRLSLPPPVYYPQATAEGGTTLVSGDGKFAKCYTCNAGVSELRHRNCANLDCNLLFLCCRKCVKDLRGCCCLTCTTATRLRPILNGDQRYRKWHTYRDLDLQGNIKISTSSPVLTTPQIHLK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00130 441 Pfam Rhodanase C-terminal 313 394 IPR022111 -
Car06g00130 441 ProSiteProfiles Rhodanese domain profile. 208 311 IPR001763 -
Car06g00130 441 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 66 424 - -
Car06g00130 441 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 177 324 IPR036873 -
Car06g00130 441 SMART rhod_4 197 308 IPR001763 -
Car06g00130 441 Gene3D - 59 165 - -
Car06g00130 441 Pfam UPF0176 acylphosphatase like domain 71 162 IPR040503 -
Car06g00130 441 CDD RHOD_YceA 185 304 - -
Car06g00130 441 Pfam Rhodanese-like domain 210 303 IPR001763 -
Car06g00130 441 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 66 424 IPR020936 -
Car06g00130 441 Gene3D - 178 332 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00130 Car-Chr6 1601434 1619388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00130 69 421 Sulfurtransferasese or Rhodanese AT1G17850 65.659 5.79e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00130 - - mtr:MTR_3g006290 651.744