Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00128 ATGGAGGCAAAGGAACAAGATGTCTCATTGGGAGCAAACAAATACCCAGAGAGACAACCAATTGGTATAGCAGCTCAGAGCCAAGACGATGGAAAAGACTACAAGGAACCACCACCTGCACCATTGTTTGAACCATCTGAACTCACATCATGGTCTTTCTACAGAGCTGGGATAGCTGAGTTTGTGGCCACTTTTCTGTTTCTTTACATAACCATCTTGACGGTTATGGGTGTGAACAGATCTGACTCAAAATGCAAATCTGTTGGTATTCAAGGGATTGCTTGGTCTTTTGGTGGCATGATATTTGCCCTCGTTTACTGTACTGCCGGAATCTCTGGGGGTCACATAAACCCAGCAGTGACATTCGGTTTGTTCTTGGCGAGGAAATTGTCGTTGACACGGGCGGTGTTTTACATCGTGATGCAGGTGCTTGGTGCTATCTGTGGAGCTGGTGTTGTTAAGGGTTTTGAGGGAAAGACCTTGTACGGTAAATTCCACGGTGGTGCTAACTTTGTTGCTCCTGGTTACACAAAAGGAGATGGACTTGGTGCTGAGATTATTGGTACTTTTGTTCTTGTCTACACCGTTTTCTCCGCCACTGATGCCAAACGTAGCGCTAGAGACTCTCACGTTCCTATTTTGGCACCCTTGCCAATTGGGTTCGCTGTCTTTTTGGTGCACTTGGCCACTATCCCAATCACTGGAACTGGTATCAACCCTGCTAGGAGTCTTGGTGCTGCCATTATCTTCAACAAAGACCTTGGCTGGGATGATCAATGGATTTTCTGGGTTGGGCCATTCATTGGTGCAGCTCTTGCAGCCCTTTACCACCAAGTTGTCATCAGAGCCATTCCTTTCAAATCAAGTTAA 870 0.4632 MEAKEQDVSLGANKYPERQPIGIAAQSQDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSDSKCKSVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQVLGAICGAGVVKGFEGKTLYGKFHGGANFVAPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDQWIFWVGPFIGAALAALYHQVVIRAIPFKSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00128 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 288 IPR034294 -
Car06g00128 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Car06g00128 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 PANTHER AQUAPORIN PIP1-2-RELATED 1 288 - -
Car06g00128 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 Gene3D Glycerol uptake facilitator protein. 40 288 IPR023271 -
Car06g00128 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car06g00128 289 MobiDBLite consensus disorder prediction 1 39 - -
Car06g00128 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00128 Car-Chr6 1569176 1571147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00128 1 289 Major Intrinsic Protein MIP AT4G23400 84.775 1.04e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00128 K09872 - gmx:100791447 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00128 06 1569176 1571147 Car02g01682 02 45784631 45787100 PCT