Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00124 ATGGAAGAGAGTATGTCAGGGTTTTGTATTAGAAATGGAAGTGTTCGTGGCAGTAGTGGAACAAAATGTGGACGTTGGAATCCAACTAGTGAACAAGTTAAGGTTCTGACTGAACTTTTCAGTTCAGGACTCCGTACACCAAGTACTGATCAGATTCAAAACATTTCTACTCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAATGTCTTTTATTGGTTTCAAAATCATAAGGCTAGAGAAAGACAGAAGCGTCGTCGTCGCAAGCTTTCTTCttatgacgacgacgatgatgataataataataataaGGATCTGCTCCGTCACCAAAATACTATCTCCATGAATTCTTCCACACAAAATTTTGCGCAGCTCTATCAGGTTTCAGAGCCGAAGAGAGTGATTGAGACACTTCAGCTCTTTCCTTTGAACTCATTTGGTGAAACAGAATCAAAGAATTTGAGGGTGCATGCAAATGAATGTAGGGATAATATGTTTTCATACACCATGGGAGAACATTCACCATTAGATCTTTGTTTGAGTACTTTTATGTAA 555 0.364 MEESMSGFCIRNGSVRGSSGTKCGRWNPTSEQVKVLTELFSSGLRTPSTDQIQNISTQLSFYGKIESKNVFYWFQNHKARERQKRRRRKLSSYDDDDDDNNNNKDLLRHQNTISMNSSTQNFAQLYQVSEPKRVIETLQLFPLNSFGETESKNLRVHANECRDNMFSYTMGEHSPLDLCLSTFM 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00124 184 Gene3D - 22 91 - -
Car06g00124 184 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Car06g00124 184 SUPERFAMILY Homeodomain-like 24 86 IPR009057 -
Car06g00124 184 MobiDBLite consensus disorder prediction 88 105 - -
Car06g00124 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 174 IPR044555 GO:0003700|GO:0099402
Car06g00124 184 SMART HOX_1 21 88 IPR001356 GO:0003677
Car06g00124 184 MobiDBLite consensus disorder prediction 84 106 - -
Car06g00124 184 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 174 - -
Car06g00124 184 Pfam Homeodomain 23 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00124 Car-Chr6 1530842 1531578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00124 1 179 Wox Gene Family AT3G11260 50.000 3.33e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car06g00124 Homeodomain 3.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00124 - - gmx:100791433 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00124 06 1530842 1531578 Car02g01680 02 45763419 45764817 PCT