Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00118 ATGGCTAAGAAACGCCACATCTCTCAGCTCGACGAACCACCCATCCCCGCCTCCAAGGATGATCACAAACCACCACAACAAGAACACATAACAGATGACCAAGAAGAAGAAGAAGGTTCAACATCATCACAAGCAGCTTCTTCATCTgaacaagtagaagaacacgaagaagaagaagatgacgacgaagaagaagaTATTCAACAAACACCTTCACAACCCGCTTCAAAAAACCATCCACCCCCTTCTTCAAACTCCCATCCAAAATCCTCATCTTCGTCCGAagaaaccgactctgaatccgaatcagatccagaaccaaacaccaaactcaaacctctcccctccaagcccatcaaatcaaagccccaagcccaagcctcCCCTCCACCGACTAAATCTGGAACCAAACGTCCAATCAATAACGACGCCAAACAATTAAATAAAAAGAAGAAAACAACCGCCGCAGATGAAGACGATAAAGAACCGGAGGACGACGTCACGAAAACCGGCGAAGACTCTAAAAAGTATTTTCAGAGACTCTTTAGCGAAGACGACGAGCTCGTAATTCTTCAAGCCCTCGTCGATTTCACCGCGAAAACAGGGAACGACCCGTGCAAGCACCTAACAGTGTTTTACGAGTTTGTGAAAAAATTGATTCACGTTGAAGTTACTATAGGGCAACTGAGGTATAAGATTCGTAGATTGAAGCAGAAATTTCACAATAAAGTGAAGAGCGGAAAACCTCCTACTTCCGCGAAACCAATTGAAATTAAAGCGTTTGAACTTGGTCTCAAGATTTGGGGTGATAAACCTAATAGGAAATCGTTGAAGAAGGAACCGGCTGCTAAGAAACCAACAACAACTAAGAAATTGGTGATGGAACCTGATTCGCCATTGGTTGTTTTGAATGAATCTAAAAAGGCTGAAGAAAGTAGTGGTAAAATTGATGCTTCGGATGCCAATTTGATTTTGAATGAAATGGTTCGTTTCGACAGGAGTGCAGGTTTCACTGGGCTGAATTTGGATGCAATAAATAAGGCAGTGGTGTTGCTTGATGAATCACAGAGGGATGAGTTTGAGGGAAGATGGAAGAAGTTGCATATTGCTGAATTGGAGCTGTTTACAAGGCGTGCTGAATTGGTCGAGGAGCAGACTTGCTTGATATTGGATGCATTGAGGTCATCATTAAGCCATTAG 1200 0.375 MAKKRHISQLDEPPIPASKDDHKPPQQEHITDDQEEEEGSTSSQAASSSEQVEEHEEEEDDDEEEDIQQTPSQPASKNHPPPSSNSHPKSSSSSEETDSESESDPEPNTKLKPLPSKPIKSKPQAQASPPPTKSGTKRPINNDAKQLNKKKKTTAADEDDKEPEDDVTKTGEDSKKYFQRLFSEDDELVILQALVDFTAKTGNDPCKHLTVFYEFVKKLIHVEVTIGQLRYKIRRLKQKFHNKVKSGKPPTSAKPIEIKAFELGLKIWGDKPNRKSLKKEPAAKKPTTTKKLVMEPDSPLVVLNESKKAEESSGKIDASDANLILNEMVRFDRSAGFTGLNLDAINKAVVLLDESQRDEFEGRWKKLHIAELELFTRRAELVEEQTCLILDALRSSLSH 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00118 399 MobiDBLite consensus disorder prediction 52 68 - -
Car06g00118 399 MobiDBLite consensus disorder prediction 1 30 - -
Car06g00118 399 Coils Coil 45 65 - -
Car06g00118 399 MobiDBLite consensus disorder prediction 69 92 - -
Car06g00118 399 PANTHER BNAANNG10740D PROTEIN-RELATED 10 396 IPR007592 GO:0006355
Car06g00118 399 MobiDBLite consensus disorder prediction 1 171 - -
Car06g00118 399 PANTHER STOREKEEPER PROTEIN-LIKE 10 396 - -
Car06g00118 399 Pfam Protein of unknown function, DUF573 178 269 IPR007592 GO:0006355
Car06g00118 399 MobiDBLite consensus disorder prediction 143 158 - -
Car06g00118 399 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00118 Car-Chr6 1479566 1481343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00118 110 395 GeBP Transcription Factor Family AT4G25210 35.738 8.05e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car06g00118 DUF573 2.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00118 - - cam:101509961 659.062