Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00090 ATGGCTGGAATGTGCTGCGGTGTTGTTGGAGAGACTGATTCTCCGGCGAGTTCACGCTCTTCTAGACGCCGGAATTTAGACCTACTACCTTTCAAATACATCGCTGACATGGCAGTATCGCAGCCAAGCACTTCCCGGAAACGCAGGCAACCGGATCTCTGTACTCCAAAGGATTTCGAAAGTTGTGAAGACACAAGCGGTGACTGTGGAAAAGACAAAAATAACAAGAAAAAGAAGGATGAATCCAAGGTTAACGACAAAGTCATTTCGGAAAATAAACCTTCGACGGAGGGTAGTTTGGAAGTTGGAGAGTTTCCAAAGTTTGGAGTGACGTCAGTTTGCGGTAGAAGAAGAGATATGGAAGATTCGGTTTCCGTGAAACCTTCTTTCTCACAAGAACCGTTTCACTACTTCGGTGTTTTCGACGGTCACGGTTGCTCTCACGTTGCGACTATGTGTAAGGAGAGGCTTCACGAAATCGTGAAGGAAGAAATTAACGAAGCGTGTGAGAATTTGGAATGGAAGAACACTATGCAACAAGGTTTCGCTCGCATGGACGACGAAGTGCAGAGTTGGAACAGTAGCAGCCAAACTGTCACTTGTAGATGCGAGCTTCAAACTCCTCACTGCGACGCCGTCGGATCCACCGCCGTCGTTGCCGTCGTCACGCCCGAGAAAATCGTCGTGTCCAACTGCGGTGACTCCCGCGCTGTTCTCTGCCGTAACGGCGTCGCCATCGCCCTTTCCTCCGATCACAAGCCGGATCGACCCGACGAATTGCTCCGAGTCCAAGCGGCTGGAGGGCGCGTGATCTATTGGGATGGTCCAAGAGTACTTGGGGTACTCGCTATGTCTAGAGCCATAGGCGACAATTATCTAAAGCCGTATGTGATTTCAGAACCTGAGGTGACGGTAACTGAACGGAAGGACGAAGATGAGTGTTTGATATTAGCGAGTGATGGTTTATGGGATGTTGTTTCAAACGACACCGCATGTGGTGTAGTGAGGATGTGTCTGAAGGCTCAGAAGCAGCCGTCTCCGCCGGGGTCTCCCGGTAACAACGACGTGACAACTGACGGTTCTGATCGGGCATGTTCTGATGCGTCCATTCTGTTGACTAAGTTGGCGTTGGCGAGACATAGTTCGGATAATGTTAGCGTGGTGGTCATTGATTTAAGGAGAGATCAACGACAATCATCAAATTCCAAGAACAATTAA 1218 0.4934 MAGMCCGVVGETDSPASSRSSRRRNLDLLPFKYIADMAVSQPSTSRKRRQPDLCTPKDFESCEDTSGDCGKDKNNKKKKDESKVNDKVISENKPSTEGSLEVGEFPKFGVTSVCGRRRDMEDSVSVKPSFSQEPFHYFGVFDGHGCSHVATMCKERLHEIVKEEINEACENLEWKNTMQQGFARMDDEVQSWNSSSQTVTCRCELQTPHCDAVGSTAVVAVVTPEKIVVSNCGDSRAVLCRNGVAIALSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKQPSPPGSPGNNDVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDQRQSSNSKNN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00090 405 PANTHER ALPHABET, ISOFORM E-RELATED 21 397 - -
Car06g00090 405 MobiDBLite consensus disorder prediction 342 361 - -
Car06g00090 405 MobiDBLite consensus disorder prediction 1 25 - -
Car06g00090 405 Pfam Protein phosphatase 2C 108 384 IPR001932 -
Car06g00090 405 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 21 397 - -
Car06g00090 405 MobiDBLite consensus disorder prediction 50 90 - -
Car06g00090 405 CDD PP2Cc 107 392 IPR001932 -
Car06g00090 405 Gene3D - 102 402 IPR036457 -
Car06g00090 405 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Car06g00090 405 SMART PP2C_4 97 390 IPR001932 -
Car06g00090 405 MobiDBLite consensus disorder prediction 37 100 - -
Car06g00090 405 ProSiteProfiles PPM-type phosphatase domain profile. 107 392 IPR001932 -
Car06g00090 405 SUPERFAMILY PP2C-like 105 393 IPR036457 -
Car06g00090 405 MobiDBLite consensus disorder prediction 346 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00090 Car-Chr6 1122106 1124241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00090 1 367 PP2C-type Phosphatase Gene Family AT3G11410 57.702 2.43e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00090 K14497 - gmx:100776356 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00090 06 1122106 1124241 Car02g01612 02 43915655 43918112 PCT