Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00083 ATGGAGGAATCTCAAGATTTGATGTGGATGATGAAAAGGAAACAAAACTTCAAGTCACCTATTGAAGCAGTACCATATGGAATTGGAGCTATCAACAGCAACAATTCTTGGGAAGAAAAGGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGATGTATATGGCCACCAAGATCTTACTCATGTCATTTCTGCAAAAGAGAGTTTAGGTCTGCTCAAGCTTTAGGTGGTCACATGAATGTTCATAGAAGGGACAGAGCTAGGCTTAAACACCACCATAATGAAGAAGACCTTCATTCTCATCATAAAAATCACTTTACTACAACAAGCAGAGTTTCATCTTCTTGGCCTTCAACCATATGCACACAAGAAAATTGTTTTCAACCTAACATGTCAACATATTCTACTTCAATTAGAAAGGGGAACCATATGGACTTTCTTAAAGGTGTTGCTAATGAAAGGAAACAGATTTTCAAAGGTTTGAATAAAAATAATTTTGTTGAAACAAGTTTGTCTATGGGACAAAAATTGGCATATGGGGACAAAGCCATCACATATAAAAGAACAAAGACTTCATCACTTCCATGTTTGAATGAAAGATGTTTAAGTGTCAAGTCTGCAGAATTTGTTATTGGAATTAAGCCTGGAATTGAAGACTTGGATCTTGAACTCAGACTAGGGAAAACACAGAAAGTTTAG 699 0.3648 MEESQDLMWMMKRKQNFKSPIEAVPYGIGAINSNNSWEEKAFAEDAARILGGCIWPPRSYSCHFCKREFRSAQALGGHMNVHRRDRARLKHHHNEEDLHSHHKNHFTTTSRVSSSWPSTICTQENCFQPNMSTYSTSIRKGNHMDFLKGVANERKQIFKGLNKNNFVETSLSMGQKLAYGDKAITYKRTKTSSLPCLNERCLSVKSAEFVIGIKPGIEDLDLELRLGKTQKV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00083 232 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 231 - -
Car06g00083 232 PANTHER OS07G0101800 PROTEIN 1 231 - -
Car06g00083 232 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Car06g00083 232 Pfam C2H2-type zinc finger 60 84 - -
Car06g00083 232 Gene3D Classic Zinc Finger 57 116 - -
Car06g00083 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00083 Car-Chr6 1043772 1045196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00083 32 95 C2H2 Transcription Factor Family AT2G37740 68.750 1.51e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car06g00083 zf-C2H2_6 3.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00083 - - gmx:102663477 264.233