Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00078 ATGCTGCCATGTGATTTGCAATTTCAAAGCATCACTCTAACCCATCATCCATTAATCCTCTGCCTCAACTTCAAATCTGTCATGGCAAAAACACTCCTGCTTCTTCTCTTTATCATGATCCTTCTAGCCTCAAACTCTATACAAACTTATTCTCAGCAAGAAGAGTTTTTCTTTGATGGATTTAACGAAGCTTCCACCACCAACAACATAACTTTAAATTTAGGTGCAGTGATTGAAAACAAAGGTATACTCCGTTTAACAAACGACACTGAAAGAATAATTGGTCATGCATTTTATTCAAATCCAATCCACTTCAAGAACAACAAGAACTCCAAAGTTTTCTCCTTTTCCACTTTTTTTGCTTTTGCAATAATTCCTCAATATCCAAAACTAGGAGGCCATGGCTTTGCCTTCACCATTTCCCCTTCCAAAAAACTCACCAATGGTTATCCTAGTCAGTACTTAGGCCTTCTCAACCCAAAAGATTTAGGCAACTTTTCAAACCACTTATTGGCAGTGGAATTCGACACGGTGCAAGACTTCGAATTCAACGACATCAATGACAACCATGTTGGTATCAACCTCAACAACATGGCATCAAACAAATCAGTCAAAGCATGTTTTTTTACAACCAATAATCAAATCCAAGACCTCAATTTGAAGAGTGGTAATGGAACTCAAGCATGGATCGACTACGATTCTTCATCGAATCAGCTAGAAGTTAGACTCTCACCAACTTCATCAAAACCAAGTTCACCAATATTATCATACCAAGTAAATCTAACTCCAATTCTTGAAGAAACTATGTATGTTGGGTTTTCTTCTTCAACAGGGTTACTCTCTAGCTCACACTATATATTGGGCTGGAGCTTCAAAATCAATGGAGAAGCCAAAACCTTGAAAAATCTTCCTTCACTCTCTTCACATACCAATAAAAGAACCCAAACTCAAAAAGCCTTAATCTTGGGTCTATCTATTTCCTTTGTAATTCTAATAGTTTTAATCATTGGTTCATCTTTATACATAAAGATGAAAAACAATGATGTTATAGAACCTTGGGAACTCGAAGTGGGTCCACATAGATTCCCTTACAAAGAACTGCACCAAGCAACAAAAGGTTTCAAGGATAAAAATCTTCTTGGGTTCGGTGGTTTTGGTCAAGTTTACAAAGGTGTGTTACAAAACACAAAAACAGAAATAGCTGTGAAGAGAATCTCACACGGATCAACACAAGGGTTACAAGAGTTTATCTCAGAGATAGAAACCATTGGGAAACTTCGTCATAGGAACCTAGTACAGTTACTAGGTTGGTGTCGGAAGCGTAATGATTTAATGTTAGTTTATGATTTCATGAAAAATGGTAGTTTGGATAAATATTTGTTTGAAGAAACAAGAGGGGTATTGAAATGGGAAGAAAGGTTTAGGATTATAAAAGGTGTGGCTTTGGGGTTAGTTTATTTGCATGAGGAATGGGAACAAGCTGTGATTCATAGAGATGTGAAAGCAGGGAATGTTCTTTTGGATTGTGAGATGAATGGTAGGTTAGGTGATTTTGGTTTGGCTAAGCTTTATGATCATGGTGAGAATCCAAGTACAACAAGGGTGGTTGGAACTTTGGGGTATTTGGCACCTGAGTTGACTAGGACAGGGAAACCAACGAGGAGTTCTGATGTTTTTGCTTTTGGGGCTTTGTTGTTGGAGGTTGTGTGTGGGAGGAGGCCTATTGAGGCAAAAGCTTTGCCTGAGGAGCTTGTTTTGGTGGATTGGGTTTGGGATAAGTGGAGGTTAGGGGAGGTGATGGAGGTTGTGGATTGTAAGTTGGGTGGGGTTTATAGTGACAAGGAGGTTTTGTTGGTGGTTATGGTTGGGTTGTTGTGTTCTCATGAGTCACCAGAAAGGAGGCCGACGATGAGGCAGGTTGTTAGGTACTTGGAGGGGGAGGTGGCATTGCCTGAGATTGATGTTTTTGGTGTGAAAAAGGATGGTGGTGGTGGTCAGTTTGATGAGTTTTTGTATTCAAAATCATATGAAAGAATGAATACATGGTCATCGGCCGGTGATGACATGGAGGGTGTGTCTACTTCGTCTCTTTCACTCTCTGGTGGCCGGTAA 2112 0.3958 MLPCDLQFQSITLTHHPLILCLNFKSVMAKTLLLLLFIMILLASNSIQTYSQQEEFFFDGFNEASTTNNITLNLGAVIENKGILRLTNDTERIIGHAFYSNPIHFKNNKNSKVFSFSTFFAFAIIPQYPKLGGHGFAFTISPSKKLTNGYPSQYLGLLNPKDLGNFSNHLLAVEFDTVQDFEFNDINDNHVGINLNNMASNKSVKACFFTTNNQIQDLNLKSGNGTQAWIDYDSSSNQLEVRLSPTSSKPSSPILSYQVNLTPILEETMYVGFSSSTGLLSSSHYILGWSFKINGEAKTLKNLPSLSSHTNKRTQTQKALILGLSISFVILIVLIIGSSLYIKMKNNDVIEPWELEVGPHRFPYKELHQATKGFKDKNLLGFGGFGQVYKGVLQNTKTEIAVKRISHGSTQGLQEFISEIETIGKLRHRNLVQLLGWCRKRNDLMLVYDFMKNGSLDKYLFEETRGVLKWEERFRIIKGVALGLVYLHEEWEQAVIHRDVKAGNVLLDCEMNGRLGDFGLAKLYDHGENPSTTRVVGTLGYLAPELTRTGKPTRSSDVFAFGALLLEVVCGRRPIEAKALPEELVLVDWVWDKWRLGEVMEVVDCKLGGVYSDKEVLLVVMVGLLCSHESPERRPTMRQVVRYLEGEVALPEIDVFGVKKDGGGGQFDEFLYSKSYERMNTWSSAGDDMEGVSTSSLSLSGGR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00078 703 SUPERFAMILY Protein kinase-like (PK-like) 356 648 IPR011009 -
Car06g00078 703 SMART serkin_6 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00078 703 Pfam Protein kinase domain 374 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00078 703 PANTHER - 31 703 - -
Car06g00078 703 Gene3D - 52 294 - -
Car06g00078 703 Pfam Legume lectin domain 54 301 IPR001220 GO:0030246
Car06g00078 703 ProSiteProfiles Protein kinase domain profile. 374 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00078 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Car06g00078 703 SUPERFAMILY Concanavalin A-like lectins/glucanases 55 301 IPR013320 -
Car06g00078 703 CDD lectin_legume_LecRK_Arcelin_ConA 55 295 IPR001220 GO:0030246
Car06g00078 703 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 31 703 - -
Car06g00078 703 ProSitePatterns Legume lectins beta-chain signature. 171 177 IPR019825 -
Car06g00078 703 Gene3D Phosphorylase Kinase; domain 1 359 450 - -
Car06g00078 703 Gene3D Transferase(Phosphotransferase) domain 1 451 656 - -
Car06g00078 703 CDD STKc_IRAK 380 646 - -
Car06g00078 703 ProSitePatterns Protein kinases ATP-binding region signature. 380 403 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00078 Car-Chr6 988254 990798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00078 54 676 Receptor kinase-like Gene Family AT3G55550 56.719 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car06g00078 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00078 - - gmx:100787552 900.197