Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00072 ATGAGTTTCGTTTTTCGAGGAGCAAGAGCTGACATAGAAAATGGGTTTCCAGGATTTATACCTGAGAGGCGTGCATTGCGTGTTCATGCAGCACGTCCTAGTAACTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATTCTGAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGCCACACAGAACTACGGTTGCATATGCCGCCATCAATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTTAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTTTGGATTCGGATAATATTTCTACTGCACCTTCTATGACTGAGGAAGAGATAAATTCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCCCAAAGtagttcctcaaaacaACAAGCATCACCATCTTCTTCTGCTGAGACACAGGATAATTCAAATGCTGTTGGAAACACGAAACCCTCCGATGATGAGCTCACATGCAGTGTATGTCTGGAGCAAGTTAATGTTGGAGATGTACTTCGGAGCTTGCCCTGCCTACATCAGTTTCATGCTAATTGCATTGATCCTTGGCTGCGGCAACAAGGGACATGCCCTGTATGCAAATTTCGCGCAGGATCTGGATGGAATGATGGTGGACATAATGATATCGCGGACATGGTTTGA 816 0.451 MSFVFRGARADIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNISTAPSMTEEEINSLPVHKYKVSGPQSSSSKQQASPSSSAETQDNSNAVGNTKPSDDELTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNDGGHNDIADMV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00072 271 PANTHER TARGET OF ERK KINASE MPK-1 1 266 - -
Car06g00072 271 CDD RING-H2_PA-TM-RING 210 252 - -
Car06g00072 271 ProSiteProfiles Zinc finger RING-type profile. 211 252 IPR001841 -
Car06g00072 271 MobiDBLite consensus disorder prediction 170 207 - -
Car06g00072 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 257 IPR013083 -
Car06g00072 271 SUPERFAMILY RING/U-box 205 255 - -
Car06g00072 271 SMART ring_2 211 251 IPR001841 -
Car06g00072 271 Pfam Ring finger domain 210 252 IPR001841 -
Car06g00072 271 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00072 Car-Chr6 950567 956030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00072 1 271 C3H Transcription Factor Family AT3G55530 77.455 3.21e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00072 K16283 - gmx:100777936 442.195