Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00059 ATGGACAGTTCCCATTCTCCTTCTTCCTGTTCCTCATCTTCGTCCAGCTGTTCATATGAAGGACACGCCACCGACACAATCAATTTGGAAGCCGAGGAGCCGCGAACGCCGTTAGCCGTCCGCCGTGCCCTTCAGCTTCTTAAATCCGGCTTACCGGAGTTGCGGCTTCAAGCCGCTCGTGATATCAGGAAACTCACAAAGACCTCACAGCGATGTCGGCGTCAGCTCTCTGAAGCTGTCGGTCCACTCGTTTCTATGCTCCGAGTCGACTCGCCCGAGTCACATGAACCCGCTCTACTCGCTTTGCTCAATCTCGCTGTCAAAGATGAAAAGAATAAAATCAATATTGTGGAGGCCGGAGCATTAGAACCAATACTTACTTTCCTGAAGTCACAAGATTCAAATCTGCAGGCATCTGCAACTGCATCATTGCTCACACTATCTGCCTCTTCAACCAACAAACCAATCATTAGTGCTTGTGGGGCCATTCCCCTTCTTGTGGAGATCCTAAGAGACGGAAGCCCACAGGCAAAAGCTGATGCCGTAATGGCTCTCTCTAATTTATCAACATACCCTGATAATCTCAGCGTTATTCTCGAAACAAATCCAATCCCTTACATAGTTGATATTCTCAAAACATGCAAAAAATCCTCAAAAACAGCTGAGAAATGCTGTGCTTTAATAGAACCCTTGGTGGATTATGATGAATGCAGAACTGCCTTGACATCTGAGGAAGGTGGGATTCTTGCAGTTGTCGAGGTTCTCGAAAATGGTACCCTCCAAAGTAGGGAGCACGCCGTTGGAGCATTATTGACAATGTGCCAAATCGATCGATGTAAATACAGGGAACCGATTCTTAAAGAAGGTGTCATTCCAGGACTACTTGAGCTCACCGTTCAAGGGACACCTAAGTCACAGACAAAAGCGCGCACCCTTTTGCAACTACTAAGAGAATCTCCTTATCCAAGATCTGAAATTCAACCTGACACTCTTGAGAATATAGTATGCAACATCATATCGCAGATCGATGGGGACGATCAATCTGGTAAAGCTAAAAAGATGCTGGCTGAGATGGTCCAAGTCAGCATGGAACAAAGTCTGAGGCATTTACAGCAAAGGGCACTTGTATGCACCCCAAGTGAACTTCCTATAGCTGGCTGTGCTTCTGAAGTTTCTTTTAAGTAA 1185 0.4616 MDSSHSPSSCSSSSSSCSYEGHATDTINLEAEEPRTPLAVRRALQLLKSGLPELRLQAARDIRKLTKTSQRCRRQLSEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPILTFLKSQDSNLQASATASLLTLSASSTNKPIISACGAIPLLVEILRDGSPQAKADAVMALSNLSTYPDNLSVILETNPIPYIVDILKTCKKSSKTAEKCCALIEPLVDYDECRTALTSEEGGILAVVEVLENGTLQSREHAVGALLTMCQIDRCKYREPILKEGVIPGLLELTVQGTPKSQTKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSELPIAGCASEVSFK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00059 394 SMART arm_5 150 190 IPR000225 GO:0005515
Car06g00059 394 SMART arm_5 234 275 IPR000225 GO:0005515
Car06g00059 394 SMART arm_5 68 107 IPR000225 GO:0005515
Car06g00059 394 SMART arm_5 109 149 IPR000225 GO:0005515
Car06g00059 394 SUPERFAMILY ARM repeat 40 344 IPR016024 -
Car06g00059 394 PANTHER U BOX DOMAIN-CONTAINING 22 377 - -
Car06g00059 394 Gene3D - 16 377 IPR011989 -
Car06g00059 394 MobiDBLite consensus disorder prediction 1 21 - -
Car06g00059 394 Pfam Armadillo-like 122 194 IPR006911 -
Car06g00059 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 161 203 IPR000225 GO:0005515
Car06g00059 394 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00059 Car-Chr6 768733 772735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00059 40 317 U-box Gene Family AT2G23140 33.571 4.85e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00059 - - gmx:100809684 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00059 06 768733 772735 Car02g01572 02 43442872 43446505 PCT