Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00054 ATGAAAAGGGATCACCAAGAAACCTACGGCGGAAGCGGAAGAGTGAGTGGAAACAAGACAACCACCACAAACAACAAGAGCAACTTTGTTAGTGTGAAAGAAGAGTGTTCATCAATGCAGAACAATTCCTTAAACGGAAAATCAAACATGTGGAGGGAAGAGAAAGAAAACAGTGGCGGAATGGACGAGTTTTTAGCAGCTTTAGGTTACAAAGTCCGTTCATCGGACATGGCTGACGTGGCACAAAAACTTGAACAACTTGAGATGGTTATGGGTTGTGCTCAAGAAGATGGAATTAACCACCTTTCTTCAGACACAGTTCATTACGACCCAGCCGATCTATATTCATGGGTTCAAACCATGCTCACAGAACTTAACCCTTCAAACACAAATCTCATCGATCCTTCTTCTCTTTTACAAGataataatattaataataataaCCTACCAATCGATGACCCTTTAGAttcttcttcttcttcttctATTCTCAACAACACATTCAACGATGACTCTGAATATGACCTCAGTGCTATTCCTGGAATGGCCGTATACCCACCTCAATACCATAACCAAGAAAACGAAATCGAAAATAAAATTGTTAACAGCAACAAGAGATTGAAGACTTGGGGGAATAATGAATCTGAAACGGAGTCCAATGATGTTTTACCGGCGTTATCTCCGCCGGCGGAACATACTAGACCGGTGGTTCTCGTTGACTCACAGGAAACTGGTGTTCGTCTTGTTCATACTATGATGGCTTGCGCTGAAGCGATTCAGCAAGAGAATCTGAAGCTTGCAGACGCGCTTGTGAAACATATAGGGTTGTTGGCTTCGTCGCAAACCGGAGCTATGAGAAAAGTCGCTTCGTATTTCGCACATGCTCTTGGTCGTAGAATCTACGGAAGCTTCCCTGAAGAAACAATGGATTCGTCTTTCTCCGATGTTCTTCACATGCACTTTTATGAATCTTCTCCTTATCTAAAATTCGCTCATTTCACTGCAAATCAAGCTATTCTAGAAGCTTTCGCCGGCGCCGGGAGAGTCCACGTCGTCGATTTTGGACTCAAACAAGGGATGCAGTGGCCGGCGCTTATGCAAGCACTAGCATTGCGCCCCGGTGGTCCGCCGACTTTCCGGTTAACCGGAATCGGACCGCCGCAGCCGGATAATACTGACGCTTTGCAACAAGTGGGTTGGAAATTGGCTCAGCTTGCTCAAACTATTGGGGTTCAGTTCGAATTTCGTGGATTCGTTTGCAACAGTTTAGCGGATCTTGACCCGAATATGCTTGAGATCCGACCCGGTGAAGCCGTTGCTGTTAACTCTGTTTTCGAGCTTCATTCTATGTTGGCCCGACCCGGATCCATTGAAAAGGTACTCAACACGGTTAAAAGGATTAAGCCTAAGATTGTTACTATCGTCGAACAAGAAGCGAACCACAACGGACCGGTTTTCGTGGACCGGTTCACGGAGGCCTTACATTATTACTCGAGTTTATTTGATTCGCTGGAAGGTTCGTCTTCTAATTCATCTTCCTCGACCGGGTCGGGTTCGTCGGGTCAGGATCTGTTGATGTCGGAGCTTTATTTAGGGAGGCAAATATGCAACGTGGTGGCTTATGAAGGAGTGGACCGTGTCGAACGACACGAGACATTGAGCCAGTGGAGGTCGAGGATGGGTGCGGCTGGGTTCGACCCGGTTCATTTAGGTTCGAACGCGTTTAAACAAGCGAGTACGTTGTTGGCATTGTTTGCAGGTGGTGATGGGTATAGAGTGGAAGAGAATAATGGATGCCTTATGCTTGGGTGGCACACGAGGTCACTCATTGCTACCTCCGCGTGGAAGCTTCCACTCAGTGAGTCATAG 1869 0.4575 MKRDHQETYGGSGRVSGNKTTTTNNKSNFVSVKEECSSMQNNSLNGKSNMWREEKENSGGMDEFLAALGYKVRSSDMADVAQKLEQLEMVMGCAQEDGINHLSSDTVHYDPADLYSWVQTMLTELNPSNTNLIDPSSLLQDNNINNNNLPIDDPLDSSSSSSILNNTFNDDSEYDLSAIPGMAVYPPQYHNQENEIENKIVNSNKRLKTWGNNESETESNDVLPALSPPAEHTRPVVLVDSQETGVRLVHTMMACAEAIQQENLKLADALVKHIGLLASSQTGAMRKVASYFAHALGRRIYGSFPEETMDSSFSDVLHMHFYESSPYLKFAHFTANQAILEAFAGAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHSMLARPGSIEKVLNTVKRIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSNSSSSTGSGSSGQDLLMSELYLGRQICNVVAYEGVDRVERHETLSQWRSRMGAAGFDPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPLSES 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00054 622 Pfam Transcriptional regulator DELLA protein N terminal 62 129 IPR021914 -
Car06g00054 622 Gene3D - 60 125 IPR038088 -
Car06g00054 622 ProSiteProfiles GRAS family profile. 239 616 IPR005202 -
Car06g00054 622 SMART DELLA_2 62 135 - -
Car06g00054 622 Pfam GRAS domain family 248 616 IPR005202 -
Car06g00054 622 PANTHER DELLA PROTEIN RGL1 56 616 IPR030006 GO:0003712|GO:0005634
Car06g00054 622 MobiDBLite consensus disorder prediction 1 28 - -
Car06g00054 622 MobiDBLite consensus disorder prediction 11 28 - -
Car06g00054 622 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 56 616 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00054 Car-Chr6 675239 677748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00054 47 617 GRAS Transcription Factor Family AT1G14920 59.931 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g00054 GRAS 4.4e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00054 K14494 - gmx:547719 862.833