Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00026 ATGCCCTTGGAAGGGATTTTCATTGAATCCACATCAACACCACCTGATCTTTCTCTTCACATAAGTCCACCAACTACTTCTAATTCTTCATCTTCTTTGATTTGTAACAACACAACTCAACTACTTAATTATGAACCTCATAATTCATCCACAACTAACTTTGTCTCTTCAAGGACTAATTTATCTCAAGCTCAAGCTCAAGCTCACACTGAACTCTCTCTTGGAAGAAATTTTAGTcaagaacaaccacaaagaccgcctcaacaacaacaacaacaacaaccacaTAACCCTTATTATCAAAGCCATTTTCCTCATCTTCAAAATCaccacaactcaacaacaccaacaactagtactaccacaaGTACTAGTTCAATGAATCACATAAATTATGGTGTTTCATTGCTTGATATGTCCTCATCGTCATCAGAAGGGTTAAGACCAATCAAAGGGATTCCAGTGTATCACAACCGTTCTTTCCCTTTTTTACCCATGGAACATTCAAGAGACAAAGATCATCAACAACATCCTAAGATGTGTTTATATCACCATATGCCTAATTCAACTCCGTCTCTTTCTTCATCATCTTCATCTCTTTCCCCCTATATAGCAGGGGGATTAGATCCAATGTCTTTTTTAAACTCTGGTGGCTCAGCAGCGGCTTATCATAGAGCCGCTGCTGCAGCCACAAGGTTTAATGGGATTTCAAGTAAACCTTTCAAATCTCACATTCCATTGCACCATCATCACTCACACTATGGAGTTGGAATTGGACCCACAGATTCATCTTCAGGGTTAATGAGATCAAGATTTTTGCCAAAGTTACCAACAAAGAGAAGCATGAGAGCACCAAGAATGAGATGGACAAGCACCCTCCATGCTCGATTTGTTCATGCTGTTGAGCTTCTCGGTGGCCATGAAAGAGCAACGCCAAAGTCAGTTCTGGAACTCATGGATGTGAAGGATCTCACATTAGCTCATGTAAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGGCCTTTCAGATGGATCCGGAGAGGATGATGTGCCTCAAATTGGAAGCAATGGTGGAAATCGTCAATTTTCAGACCAAAGAGGCGTAACAGTACAACAAGATATGGATTACTCTTCCAACAATACTCTTTGGAGTAATTCTTCAAGTAGTAGAGAACCATGGCCACAAACAAATTCTAATGACATAGATGGTTTCAGACCAACCATTTTTCAGTCACAACCAATAGCAGGAGGGCATCAAATTCAGGAGTGTGATTCAAATCAACTCAAGAACAATTTGTCAGGATCTAATTTAGAGTGTAAGAATCCAAGCTTGGAGTTCACATTAGGCATACCAGATTGGAATGGCAAAGGACAAGCCTAA 1410 0.3745 MPLEGIFIESTSTPPDLSLHISPPTTSNSSSSLICNNTTQLLNYEPHNSSTTNFVSSRTNLSQAQAQAHTELSLGRNFSQEQPQRPPQQQQQQQPHNPYYQSHFPHLQNHHNSTTPTTSTTTSTSSMNHINYGVSLLDMSSSSSEGLRPIKGIPVYHNRSFPFLPMEHSRDKDHQQHPKMCLYHHMPNSTPSLSSSSSSLSPYIAGGLDPMSFLNSGGSAAAYHRAAAAATRFNGISSKPFKSHIPLHHHHSHYGVGIGPTDSSSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDVPQIGSNGGNRQFSDQRGVTVQQDMDYSSNNTLWSNSSSSREPWPQTNSNDIDGFRPTIFQSQPIAGGHQIQECDSNQLKNNLSGSNLECKNPSLEFTLGIPDWNGKGQA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00026 469 MobiDBLite consensus disorder prediction 49 126 - -
Car06g00026 469 Gene3D - 284 341 - -
Car06g00026 469 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 469 - -
Car06g00026 469 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 285 338 IPR006447 GO:0003677
Car06g00026 469 MobiDBLite consensus disorder prediction 9 33 - -
Car06g00026 469 MobiDBLite consensus disorder prediction 340 412 - -
Car06g00026 469 MobiDBLite consensus disorder prediction 362 412 - -
Car06g00026 469 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 469 IPR044847 GO:0000976|GO:0006355|GO:0010158
Car06g00026 469 SUPERFAMILY Homeodomain-like 282 338 IPR009057 -
Car06g00026 469 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00026 Car-Chr6 352422 358710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00026 1 466 G2-like Transcription Factor Family AT5G16560 41.283 2.14e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g00026 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00026 - - ccaj:109796302 590.882