Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00020 ATGGTAGTCAAAGTTTATGGTTCAATAAGGGCAGCATGCCCTCAAAGAGTGTTGGCTTGCCTCTTAGAGAAAGGGATAGAATTTGAACTTGTGCATGTTGATCTTGATAAAGGAGAACAAAAGCACCCTGAATTCCTTCTCCTACAGCCATTTGGTCAAGTCCCAGTAGTAGAGGATGGTGATTTCAGACTCTTTGAATCAAGGGCAATTGTAAGGTACTATGCAACAAAATATGCAAATCAAGGTACTGACCTAGTTGGTACAACTTTAGAGGAGAAAGCTTTGGTAGACCAATGGCTTGAAGTAGAAGCACACAATTTCAATGATTTATGTTTCAATATAATGTTTCATCTTATAATCTTACCTAGGATGGGTAAACCTGGAGACATAGCTTTAGCTCATAGTTGTGAACAAAAACTAGAGAAGGTGTTTGATATTTATGAACAAAGGCTTTCTAAAAGCACTTATCTTGCTGGTGATAAGTTCAGTTTGGCTGATCTTAGCCACCTTCCTGGAATTGAACATCTTATTGAGGAAGCAAAATTGGGACATTTGATTACTGAGAGAAAGAATGTGAATGCTTGGTGGGAGAAAATTTCAAGTAGGCCAGCTTGGAAGAAATTGAAGACTTTGGTTAACTAA 642 0.3801 MVVKVYGSIRAACPQRVLACLLEKGIEFELVHVDLDKGEQKHPEFLLLQPFGQVPVVEDGDFRLFESRAIVRYYATKYANQGTDLVGTTLEEKALVDQWLEVEAHNFNDLCFNIMFHLIILPRMGKPGDIALAHSCEQKLEKVFDIYEQRLSKSTYLAGDKFSLADLSHLPGIEHLIEEAKLGHLITERKNVNAWWEKISSRPAWKKLKTLVN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00020 213 Gene3D - 87 208 - -
Car06g00020 213 SUPERFAMILY GST C-terminal domain-like 82 208 IPR036282 -
Car06g00020 213 Pfam Glutathione S-transferase, C-terminal domain 119 203 IPR004046 -
Car06g00020 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 212 - -
Car06g00020 213 Gene3D Glutaredoxin 2 86 - -
Car06g00020 213 SFLD Main (cytGST) 4 202 - -
Car06g00020 213 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Car06g00020 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Car06g00020 213 CDD GST_C_Phi 91 209 IPR034347 -
Car06g00020 213 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Car06g00020 213 PANTHER GLUTATHIONE S-TRANSFERASE F12 2 212 - -
Car06g00020 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Car06g00020 213 CDD GST_N_Phi 2 77 - -
Car06g00020 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00020 Car-Chr6 240993 244785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00020 1 211 Glutathione S-transferase Gene Family AT3G03190 59.242 9.89e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00020 K00799 - gmx:100812502 369.392