Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03473 ATGGCCACCACCGCAACAGCCGCTGCCACGTCACACTTTTTCGGCACCCGTCTCAGTAAACCAAGTTCAAAGATTGGAAGAATCCGCTGTTTTTTCAATCTGAAACCGAAAAAAGCAGCAGAGAAGAAAAAGGAAGTGAAACCTCGACAACCGGAAGGTGAGCGGCTAGTATGGTTTCCAGGTGCGTCATCACCGGAATGGCTGGACGGTAGCTTGATAGGTGACCGTGGATTTGATCCATTGGGATTCGCGAAACCAGCGGAGTATTTACAGTATGACCTTGACTCGCTTGACCAGAATCTGGCGAAGAACCTTGCTGGAGATATTATTGGAACTAGAATCGAAGTTGCGGAGGTTAAAGCGACGCCGTTTCAGCCTTATACGGAAGTGTTTGGGATTCAGAGGTTTCGTGAATGTGAACTTATTCATGGAAGGTGGGCTATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCTCATGGCAAGATGCTGGAAAGGTTGAGCTAGTGGAAGGGTCATCATACCTAGGACTTTCTCTTCCATTCTCATTGACTACATTGATATGGATTGAAGTGTTAGTGATCGGTTACATTGAGTTTCAAAGGAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGCAAATTCTTTGATCCTCTTGGTTTAGCCAGTGATCCTCAAGAGAAAGAAAGACTTCAATTGGCTGAGATTAAACATTCTCGCTTGGCTATGGTTGTTTTCCTCATCTTTGCAATCCAAGCTGCTGTTACTGGAAAAGGTCCTATTGCTTTCATTGCTACCTTCAACCAGTGA 831 0.4573 MATTATAAATSHFFGTRLSKPSSKIGRIRCFFNLKPKKAAEKKKEVKPRQPEGERLVWFPGASSPEWLDGSLIGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGDIIGTRIEVAEVKATPFQPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVSWQDAGKVELVEGSSYLGLSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPQEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03473 276 Pfam Chlorophyll A-B binding protein 65 260 IPR022796 -
Car05g03473 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 275 IPR001344 GO:0009765|GO:0016020
Car05g03473 276 Gene3D Chlorophyll a/b binding protein domain 57 276 - -
Car05g03473 276 SUPERFAMILY Chlorophyll a-b binding protein 54 273 - -
Car05g03473 276 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03473 Car-Chr5 79254204 79255666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03473 14 273 Chloroplast and Mitochondria Gene Families AT3G08940 70.881 1.57e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03473 K08915 - gmx:100820335 447.973