Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03472 atgcatgaagttccaattgatggtgaaatgccacaaaaaGGTGTTCTCTTCATAACTCCATCTCTCCCTTCTCAAACAGTACTCATTCCCCACCTTATTACTTCTCTCTCTAAAACACTCTCTATCTTCCCACCCCTCTCTGGCCGTTTCGTAACCGACTCAAACGGTTACATTTACATCACTTGCAACGACGCTGGTGCTGATTTCATCCACGCCACCGCCACTCATTTCACTCTCACCGACCTTTTGTCATCACCTGATATCCATCAAGCTTTCGAACAATTCTTCCCATTCCACCGTAAACTCAACTACGATGCTCATTTCTCACCTATCTTAGCCGTTCAAGTCACTTACCTTCCCGACGGAGTATTCATCGGCGTCGCTGTCTGCCACGCTGTCACCGACGGCTCCATCCTTTGGAACTTCTTCAATACCTTCGCTGATATTTCCCAGGGAGTCACGCCACTTTCGAGAATCCCGGACTTCCGCCGGGAATCAATCCTTAACTCCAAGGTTGCTGTCCAGTTACCGGAAGGTGGCATCGAGTTGGCGTTCAACCCTGACGAGCCATTGCGAGAGAGGATTTTCAGTTTCTCTCGCGAAGCAATTCAGAAACTGAAATCGAGAGTAAACCACCACCGTACTTCGCCGGAGAATGCTGACGTGGCAGAGCTAATATCAAAACTGAGCGACGACACTCAACTGAAAACAGTTACGAGAAACGGAAGCGAAATGGAAGATGTTTCGTCGTTTCAGTCGCTATGCGCGATGATGTGGCAATGTGTGACACGCGCTAGAAAACTTGATGGTTCTGAAACGACGACGTTTAGAATGGCTGCGAATATTCGTAACCGTTTGGAGCCGAAGTTAGGTGAGTACTACTTCGGGAACGCGATTCAGAGCATTGCCACGTGTTGCAAAGTTTATGAGGTGTTGAACAATGATCTTACGTGGTGTGCTGAGCAACTGAATAAAAGTGTGAGGGAGTACGATAGCGTTGTGGTGAGGCGTGTCGTAGAGAATTGGGAGCGTGAGCCGAAGTGTTTCAAGCTGGGGAGCAAAGATGGTGCGTTGCTGCTGATGGGTAGTTCGCATAGATTCCCTATGTATGACAATGATTTTGGATGGGGAAGGCCGTTGGCGGTGAGGAGCGGTGGAGCTAACAAGTTTGATGGTAAGATATCGGTCTATCCGGGGAGGAAAGGAGGCGGCAGTATCGACTTAGAGGTGGCTTTGGCGCCTGAAACGATGGCGCTGCTTGTCACTGATTCCGAGTTCATGCCTTACGCCACTTGA 1296 0.4784 MHEVPIDGEMPQKGVLFITPSLPSQTVLIPHLITSLSKTLSIFPPLSGRFVTDSNGYIYITCNDAGADFIHATATHFTLTDLLSSPDIHQAFEQFFPFHRKLNYDAHFSPILAVQVTYLPDGVFIGVAVCHAVTDGSILWNFFNTFADISQGVTPLSRIPDFRRESILNSKVAVQLPEGGIELAFNPDEPLRERIFSFSREAIQKLKSRVNHHRTSPENADVAELISKLSDDTQLKTVTRNGSEMEDVSSFQSLCAMMWQCVTRARKLDGSETTTFRMAANIRNRLEPKLGEYYFGNAIQSIATCCKVYEVLNNDLTWCAEQLNKSVREYDSVVVRRVVENWEREPKCFKLGSKDGALLLMGSSHRFPMYDNDFGWGRPLAVRSGGANKFDGKISVYPGRKGGGSIDLEVALAPETMALLVTDSEFMPYAT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03472 431 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 12 429 - -
Car05g03472 431 Pfam Transferase family 11 427 - -
Car05g03472 431 Gene3D - 182 422 IPR023213 -
Car05g03472 431 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 12 429 - -
Car05g03472 431 Gene3D - 6 177 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03472 Car-Chr5 79234862 79236229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03472 35 420 Monolignol Biosynthesis Gene Families AT5G48930 27.384 1.10e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03472 - - cam:101506439 706.057