Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03445 ATGTCGAAGGAAGTGAGCGAAGAAGGTCACTTGCAGACTCATCATCATGGTGGTAAAGACTACGTAGACCCACCACCAGCACCCCTCCTCGATTTCGCTGAGATTAAACTCTGGTCCTTTTACAGAGCTCTCATCGCCGAGTTCATAGCCACACTCCTCTTCCTCTATGTCACCGTCGCCACCGTCATTGGTCACAAAAAACAAACCGGTCCCTGCGACGGTGTTGGGCTTCTAGGCATAGCCTGGTCCTTCGGTGGCATGATCTTCGTCCTTGTCTACTGCACCGCCGGCATCTCCGGTGGACACATAAACCCTGCGGTTACATTTGGGTTGTTTTTGGCACGTAAGGTGTCTCTGATACGTGCGGTGTTATACATGGTAGCACAGTGTTTGGGTGCTATTTGTGGTGTTGGATTGGTGAAAGCTTTGATGAAGCAACCTTACAACAACCTTGGTGGCGGTGCTAACTCTGTTGCTTCTGGTTACTCCAAAGGAAGTGCACTTGGTGCTGAAATGATCGGAACTTTTGTACTTGTGTACACAGTGTTCTCTGCCACAGACCCAAAGAGAAACGCACGTGATTCGCATGTGCCTGTTTTGGCTCCTTTGCCAATTGGTTTTGCTGTTTTCATGGTTCATTTGGCAACTATACCAATCACCGGTACAGGTATCAACCCTGCAAGGAGCTTCGGTGCTGCTGTTATCTTCAACAATGCTAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGGCCTTTCGTGGGAGCTTTAGCGGCGGCTGCGTACCATCAATACATTCTTAGAGCGGCGGCTATCAAAGCGTTGGGGTCTTTCAGGAGCAATCCCACCAACTAG 855 0.4959 MSKEVSEEGHLQTHHHGGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKALMKQPYNNLGGGANSVASGYSKGSALGAEMIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03445 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Car05g03445 284 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Car05g03445 284 PANTHER BNAC03G65520D PROTEIN 1 283 - -
Car05g03445 284 CDD MIP 42 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 Gene3D Glycerol uptake facilitator protein. 27 284 IPR023271 -
Car05g03445 284 PRINTS Major intrinsic protein family signature 42 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 PRINTS Major intrinsic protein family signature 170 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 MobiDBLite consensus disorder prediction 1 21 - -
Car05g03445 284 TIGRFAM MIP: MIP family channel proteins 46 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 MobiDBLite consensus disorder prediction 1 22 - -
Car05g03445 284 Pfam Major intrinsic protein 35 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g03445 284 SUPERFAMILY Aquaporin-like 34 268 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03445 Car-Chr5 78939708 78941274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03445 1 284 Major Intrinsic Protein MIP AT4G35100 89.085 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03445 K09872 - thj:104804325 526.939