Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03435 ATGGAGGACGATGTGAGATGGTGTTTGGAATTTCTTGGTGGAAAATCAAGTGTAGACATCAGTGAAGTTAATAAACGGTTTCTTAGAATGTCAGTCTCCGACAATTGTTCTCGCTTGAAGAAGACCATCCTCCTCCAAACCCTACAAGACGAGTTGTACTCGAAAGCTTCTACCTCAGAATGGATGCTCGAAGCTCTCGAGGTAATGGAAACTTTACTTCTTTCTGAAGACTCTTGTTCGAATCAAATCACCGCCACCATGAAAGACGCTTATTGCGCCATTGCAGTTGAGTGTACTATCAAATACCTTGAAGTTGAAACGTGCAACCCTGCTTACCGTCAAGCTGTGGAGAGAATATGGAAGGGTAGGGTTCAGAAAATGGAGCCATCTTCTGAACGTGAAGGAAGTTTTTTGTTTTCACCTGAATTGAAACGCTGGAAAACTATTATTGTGGTTTCCCTTTTGAACCCTACGTACGTCGACATGTTTGCTTCTATCACACATCCTCGAAGGGATGCCCTAAAAAAGTTGAAACTTTATTTGGATGAAGCTTTGCAAAACCTAGCTCTTTCTAGGAATCATCAAACAGAAATTCAGAAAGACAACGAGACATCGCTTAAAGGCAAGGTTACTACTACTGGCATTGATGATGCTAATCTTACAAAGACAGTTACTGTATATGATGTTTGTGACTCTAGCTTCAGGGAACCAAATAGGGCTGCTCGTACTCATAAGGGAGGAACATCTAATAAAACTAGAATTACATTGATTAGTCCGAAGAAGGTGAAAATTTCTCCGCTGAAGAAATACGAACCAAAAAAGATCTTTAGAAGAAGAAAACCGAAAAGGTGGAGTGAATTGGAAGAAGAGACGCTGAGAACTGCCGTACGCAAATTAGGCGAAGGAAATTGGACAGCAATCCTGAATACTTATACATTTGATAACAGAACTGGGGTTGATCTCAAGGATAAGTGGAGAAATATGGAGCGCTCTGGACGCCAATGA 1005 0.4109 MEDDVRWCLEFLGGKSSVDISEVNKRFLRMSVSDNCSRLKKTILLQTLQDELYSKASTSEWMLEALEVMETLLLSEDSCSNQITATMKDAYCAIAVECTIKYLEVETCNPAYRQAVERIWKGRVQKMEPSSEREGSFLFSPELKRWKTIIVVSLLNPTYVDMFASITHPRRDALKKLKLYLDEALQNLALSRNHQTEIQKDNETSLKGKVTTTGIDDANLTKTVTVYDVCDSSFREPNRAARTHKGGTSNKTRITLISPKKVKISPLKKYEPKKIFRRRKPKRWSELEEETLRTAVRKLGEGNWTAILNTYTFDNRTGVDLKDKWRNMERSGRQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03435 334 PANTHER MYB TRANSCRIPTION FACTOR 2 199 - -
Car05g03435 334 PANTHER MYB TRANSCRIPTION FACTOR 235 331 - -
Car05g03435 334 ProSiteProfiles Myb-like domain profile. 276 329 IPR001005 -
Car05g03435 334 SMART sant 280 331 IPR001005 -
Car05g03435 334 CDD SANT_TRF 282 330 - -
Car05g03435 334 Pfam Myb-like DNA-binding domain 282 328 IPR001005 -
Car05g03435 334 SUPERFAMILY Homeodomain-like 278 329 IPR009057 -
Car05g03435 334 Gene3D - 274 332 - -
Car05g03435 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 283 333 IPR017930 -
Car05g03435 334 PANTHER MYB TRANSCRIPTION FACTOR 2 199 - -
Car05g03435 334 PANTHER MYB TRANSCRIPTION FACTOR 235 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03435 Car-Chr5 78841624 78844545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03435 33 334 Single Myb Histone (SMH) Gene Family AT1G15720 27.763 4.85e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g03435 Myb_DNA-binding 1.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03435 - K11111 cam:101498622 661.759