Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03432 aTGCAAACTCAATTGCCATCATCTTCTTATTCTTCTCCAATAGGTAACTTTCAGTTCTCCGCGCCTTCTAAAATGTCTAACCCTAAAGTTTTCTTCGACATGACTGTCGGAGGCCAACCCGCCGGTCGTATTGTCATGGAGCTTTACTCCGACACTACTCCTCTAACCGCCGATAATTTCCGTGCACTCTGCACCGGCGAGAAAGGAACCGGTCGCAGCGGGAAGCCTCTCCACTACAAAGGCTCTTCCTTCCACCGCGTTATCCCTAACTTCATGTGTCAAGGAGGTGACTTCACCGCCGGAAACGGAACCGGCGGAGAGTCCATCTACGGGGCGAAATTCGCCGACGAGAATTTCATCAAGACGCACACCGGACCTGGTGTGCTTTCGATGGCGAATGCGGGTCCCGGTACGAACGGATCTCAGTTTTTCATATGCACGACGAAGACGGAGTGGCTTGATGGGAAGCACGTGGTTTTTGGTCAGGTGGTTGAGGGAATGGATGTTGTGAAGGAGATCGAGAAAGTGGGGTCCAGTTCTGATACTATGGTCACTGGTACTGTCATTTGTGACCAATGCAAAGATGGACACAGATCCCTTTTCGATTTTCCTGTTAATGGTGCAAAAGTAACTCTGTCATGTACGGACAGCAATGGACAAACGACAATGTCAAGAGAAGAAACAACAAATTGGTTTGGAAGCTATACAATGAGGTTTGATGGTGCACCAGACTTAGGTGGTTGTTATGCTCGTGTAACAGGAAGTAATGAACAAGGATCAATGAGTTGTGGTGAAGCCTGCTGA 804 0.4863 MQTQLPSSSYSSPIGNFQFSAPSKMSNPKVFFDMTVGGQPAGRIVMELYSDTTPLTADNFRALCTGEKGTGRSGKPLHYKGSSFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTTKTEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSDTMVTGTVICDQCKDGHRSLFDFPVNGAKVTLSCTDSNGQTTMSREETTNWFGSYTMRFDGAPDLGGCYARVTGSNEQGSMSCGEAC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03432 267 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 79 96 IPR020892 GO:0003755|GO:0006457
Car05g03432 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 25 192 - -
Car05g03432 267 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 184 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 142 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 154 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 48 63 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 96 IPR002130 GO:0000413|GO:0003755
Car05g03432 267 SUPERFAMILY Cyclophilin-like 20 191 IPR029000 -
Car05g03432 267 CDD cyclophilin_ABH_like 28 191 - -
Car05g03432 267 Pfam Pollen protein Ole e 1 like 184 257 - -
Car05g03432 267 Gene3D - 17 198 IPR029000 -
Car05g03432 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 25 192 - -
Car05g03432 267 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 31 195 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03432 Car-Chr5 78821622 78826644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03432 7 176 U-box Gene Family AT5G67530 42.857 2.43e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03432 K01802 - gmx:106795232 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03432 05 78821622 78826644 Car05g03432 05 78821622 78826644 ECH