Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03428 ATGGTGCTGATTGTTCATCATGTATATTTTCCTGCTGCACTGAAGTTTATATTGTTAATTACTCTCTGCACTTTATCAGattgctatgaccctttggatccaaatgggaacatttctataacatttgacatttaCCAACGTATGGAAAATGGATATCTGGCAAGGGTGACTCTACAAAACTATCATCAATATAGGCATGTAGACACACCAGGGTGGAAACTAGGATGGACATGGCTGAACAATGAAGTGATATGGTCAATGAGTGGTGCAATTGCAACTGATAGAGGTGATTGTTCATCTTACAGTGGTTCTCAAATGCCACATTCATGCAAGAAAGATCCAATCATAATTGATATAGCTCAAGATGTCACACAAAACAGGTCAGACCATTGCTGTCGCAGCGGACGCCTCTCTGCCCGTGCTGTTGATTCTTTCAATTCATTCTCTTCATTTGAACTTGAAGTAAGAAACTTGGAGGAGAAAGAAAATTCACTTGGACAAGCACCTAATAATGTTACACTCATGGCACCAGGTCCTGGTTACACTTGTAGCCCATTTCTGATTACTGATCCAACAGTGTCCTTAGATTTTGGAGGACAAAGACAAGTTCCAGTTCTCAGAACTTGGAAGTCGGAATGTACATACTCTAGTTTCTTGGCAAACAAGTCACCAGTATGTTGTGTTTCATTCTCAACATTTTACAATCCTATTATCACACCATGCCGCAATTGCAGTTGTGGTGGATGCAGGGAAGCAGATAAAAATACAGTGTCTTGCATAAGGCCAGGTGATCCCTTGAGAGGGTCAAATGATGAGATTGAGAACAACAGCATAATTGAATGCACTGACCACATGTGTCCAATTCGAGTCCATTGGCATTTCAAGAACAACTATTTGAATCATTGGAGGGTGAAGCTTACAATTTCAAACTACAACTATAATAGAAACTACTCTAACTGGAATGTCCTGGTTCAACATCCTGGTTTCAACCAAAAAACAACAACTTATAGTTTCAACAGCACTAAACTTCCCACTCTTGGCATCCAAGATGGAGTTGCACTTTTGTGGGGGATAGATTTTTACAACAGTGAATTATTGCATTCTGATAAGGATAGAGTTGGTTCTGTGACAACAGAAATACTATTGGAAAAGGATGAGAATTCATTCACATTGCAAAATGGATGGGCATTCCCAAGAAGAATATATTTCAACGGTGAAAATTGTGACATGCCTTTACCTGACACATTCCCTATGTTACCAAATGGTAGCTCCAATTTAAGACCTACTTGCATTGATTTCGGTCTTTCATTAATTTCTTTGTTCATTCTTCTCTTACTACTGTTGTAG 1347 0.3764 MVLIVHHVYFPAALKFILLITLCTLSDCYDPLDPNGNISITFDIYQRMENGYLARVTLQNYHQYRHVDTPGWKLGWTWLNNEVIWSMSGAIATDRGDCSSYSGSQMPHSCKKDPIIIDIAQDVTQNRSDHCCRSGRLSARAVDSFNSFSSFELEVRNLEEKENSLGQAPNNVTLMAPGPGYTCSPFLITDPTVSLDFGGQRQVPVLRTWKSECTYSSFLANKSPVCCVSFSTFYNPIITPCRNCSCGGCREADKNTVSCIRPGDPLRGSNDEIENNSIIECTDHMCPIRVHWHFKNNYLNHWRVKLTISNYNYNRNYSNWNVLVQHPGFNQKTTTYSFNSTKLPTLGIQDGVALLWGIDFYNSELLHSDKDRVGSVTTEILLEKDENSFTLQNGWAFPRRIYFNGENCDMPLPDTFPMLPNGSSNLRPTCIDFGLSLISLFILLLLLL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03428 448 Pfam COBRA-like protein 52 216 IPR006918 GO:0010215|GO:0031225
Car05g03428 448 PANTHER COBRA-LIKE PROTEIN 5 442 - -
Car05g03428 448 PANTHER PROTEIN COBRA 5 442 IPR006918 GO:0010215|GO:0031225
Car05g03428 448 PIRSF COBRA 1 448 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03428 Car-Chr5 78797813 78800736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03428 17 447 COBRA Gene Family AT3G29810 46.396 8.44e-137 398