Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03424 ATGGCTGCACCAAAcctctcttcttccctctccctctccctctccaaccccaaactcttctcttcttcttccttttccacttTCAAACCATCAACAATCTCTCACCCTACTTTTTTCCACCACAAAACTCTCTCCTTCTCAACCCTTAAAACCAACCACAAAACACTTTCCTCATGcaacaacaacaacaacaacaacaCATTCCCATTCACAAACACCACTTCTGATCAAAACGATGATGACGAAAAGCCTCGCGAAGAATGCGGCGTTGTTGGTATATACGGCGATCCAGAAGCTTCTCGTCTCTGTTATCTCGCTCTCCACGCTCTTCAACACCGTGGTCAAGAAGGTGCAGGTATCGTAACCGTTAACAATAATAACGTCCTTCAAACGGTAACCGGCGTTGGTCTTGTTTCCGAAGTTTTTAACGATACTAAACTCCGTCAATTACCGGGAACTTTATCAATCGGTCATGTTCGTTACTCAACCGCAGGCCAATCTATGCTTAAAAACGTTCAACCTTTTGTTGCCGGTTACCGGTTCGGTTCTGTTGGTGTTGCTCATAATGGCAATTTCGTCAATTACCGTAAATTAAGAACAGAACTTGAAGAAAAAGGTTCAATTTTTAACACTACTTCTGATACTGAAGTTCTTCTTCATCTTATTGCAACTTCAAAGCATAGACCTTTTATTTTGAGAATTGTTGATGCTTGTGAAAAGGTTCAAGGTGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTCGAGATCCTTTCGGTTTTCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTGCTATTGTTTTTGCATCAGAAACATGTGCACTTGATTTAATTGAAGCTAAATATGAAAGAGAAGTTTTTCCTGGTGAAGTTATTGTTGTGGATAAGAATGGTGTTCAATCACTTTGTCTTATGTCTCATCCACAACCAAAACAATGTATTTTTGAACATATTTACTTTTCACTTCCAAATTCTGTTGTTTTTGGAAAATCAGTTTATGAATCTAGAAGATTGTTTGGTGAAATATTGGCTACTGAGAGTCctgttgattgtgatgttgttatagctgttcctgattctggtgttgttgctgCACTTGGTTATGCTGCAAAAGCCGGTGTCCCTTTTCAACAAGGGTTGATTAGGTCACACTATGTTGGTAGAACTTTCATTGAGCCATCACAGAAGATAAGAGATTTTGGTGTGAAGTTGAAGCTTTCGCCGGTTCGCGCTGTTCTTGAAGGAAAAAGGGTTGTTGTtgttgatgattcaattgtgaggggaacaacttcatcaaaaattgtgaggttgaTTAAAGAAGCTGGTGCTAAAGAAGTTCATATGAGAATTGCATGTCCACCAATTATTGGGTCTTGTTATTATGGTGTGGATACACCTAGCTCTGAGGAGTTGATATCTAATAGGATGAGTGTGGATGAGATAAAGGAGTTTATTGGATGTGATTCACTTGCTTTTCTTCCTATTGATAAATTGAAGAATTTGTTGGGTGATGATTCTCCTAATTTCTGTTATGCTTGCTTTTCTGGGGTGTATCCTGTTGAACCTACTGAACTTAAGGCCAAGAAGGTTGGTGTTGAACTTTTGGAAGATGGAATAAATGGGTTGGTTCAAGGAAAGCCAAATGAGAAAGAGGTGAAGATTGGTGGAATCTGA 1707 0.3456 MAAPNLSSSLSLSLSNPKLFSSSSFSTFKPSTISHPTFFHHKTLSFSTLKTNHKTLSSCNNNNNNNTFPFTNTTSDQNDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNNVLQTVTGVGLVSEVFNDTKLRQLPGTLSIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRKLRTELEEKGSIFNTTSDTEVLLHLIATSKHRPFILRIVDACEKVQGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEAKYEREVFPGEVIVVDKNGVQSLCLMSHPQPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMSVDEIKEFIGCDSLAFLPIDKLKNLLGDDSPNFCYACFSGVYPVEPTELKAKKVGVELLEDGINGLVQGKPNEKEVKIGGI 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03424 568 CDD PRTases_typeI 346 462 IPR000836 -
Car05g03424 568 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 41 554 - -
Car05g03424 568 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 88 530 IPR029055 -
Car05g03424 568 Gene3D - 348 512 IPR029057 -
Car05g03424 568 CDD GPATase_N 88 339 IPR035584 -
Car05g03424 568 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 88 325 IPR029055 -
Car05g03424 568 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 88 308 IPR017932 -
Car05g03424 568 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 41 554 - -
Car05g03424 568 SUPERFAMILY PRTase-like 324 535 IPR029057 -
Car05g03424 568 TIGRFAM purF: amidophosphoribosyltransferase 88 530 IPR005854 GO:0004044|GO:0009113
Car05g03424 568 Hamap Amidophosphoribosyltransferase [purF]. 87 529 IPR005854 GO:0004044|GO:0009113
Car05g03424 568 Pfam Phosphoribosyl transferase domain 346 460 IPR000836 -
Car05g03424 568 Pfam Glutamine amidotransferase domain 167 286 IPR017932 -
Car05g03424 568 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03424 Car-Chr5 78722594 78724733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03424 69 552 PRT Gene Family AT4G34740 82.851 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03424 K00764 - gmx:100801720 853.203