Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03398 ATGGCTTCATCAAGTGGAACATCTTCAGGGTCATCAACACTACCAAACTCAGGTTCAGAGGAAGATTTACAATTGATGATGGATCAAAGAAAAAGAAAGAGAATGATATCGAACCGGGAATCGGCAAGAAGATCAAGAATGAGAAAACAGAAACACTTGGATGATCTTGCTGTTCAGGTTGGTCAATTAAGGAACGAGAATCATCAGATTGTAACTTCTGTTAACCTCACAACTCAACGTTACTTGGCTGTTGAATCTGAAAACTCTGTGCTTAGAGCTCAACTCAATGAACTCAACAATAGACTTGACTCTTTGAATGAAATCATCAATTTCTTGAATGTATCCAATGGAGTTTTTGAACCTCTTGATGATaataacaacaataacaacaacaaTTACTTCAACCCTTTGAATATGGCTTATTTGAATCAACCAATTATGGCTTCTGCAGATATGATGCATTATTGA 468 0.3504 MASSSGTSSGSSTLPNSGSEEDLQLMMDQRKRKRMISNRESARRSRMRKQKHLDDLAVQVGQLRNENHQIVTSVNLTTQRYLAVESENSVLRAQLNELNNRLDSLNEIINFLNVSNGVFEPLDDNNNNNNNNYFNPLNMAYLNQPIMASADMMHY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03398 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Car05g03398 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 153 - -
Car05g03398 155 Pfam bZIP transcription factor 30 73 IPR004827 GO:0003700|GO:0006355
Car05g03398 155 Coils Coil 81 115 - -
Car05g03398 155 Gene3D - 28 82 - -
Car05g03398 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 153 - -
Car05g03398 155 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Car05g03398 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Car05g03398 155 MobiDBLite consensus disorder prediction 30 49 - -
Car05g03398 155 MobiDBLite consensus disorder prediction 1 23 - -
Car05g03398 155 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Car05g03398 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03398 Car-Chr5 78542509 78543823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03398 26 155 bZIP Transcription Factor Family AT4G34590 57.664 1.26e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g03398 bZIP_1 4.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03398 K25786 - pop:7470005 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03398 05 78542509 78543823 Car05g03398 05 78542509 78543823 ECH