Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03381 ATGGTGGATCGAAGAGGCATAGTGTGGTTTCTGTTATTGCTGTTTTTTCTGTGTTTTGAGGTAACATTAGAGCAGATTGAACCACTTAGTTCACCTAAGGAACGAGCAGCACTTCTTCAATTAAGAACTTCTTTAGGTTTAAGAAGCAAAGAATGGCCAAGAAAACCAGACCCTTGCTTAATCTGGATTGGTATAACATGTCAGAATGGTCGTGTTGTTGGGATCAACATCTCTGGTTTTCGAAGAACTCGTATTGGAAGAAGAAACCCTCAATTTTCTGTTGATGCTTTGGTTAATTTCACTTTATTGCAGTCTTTTAATGCCTCTAAGTTTTACCTTCCTGGTCCAATTCCTGATTGGTTTGGTCTTAGTTTCAATTCGCTTCGTGTGCTTGATTTTCGTTATTGTTCGATTATAAATGCTATTCCTAACACTCTTGGGAATTTGACTAGTCTTAATGTTCTTTATCTTTCTGATAACAATCTTACTGGGAATGTTCCTCATAGTTTAGGTCAACTCTCGGGTCTTTCGGTTCTTGATCTTTCTAGGAATTCTCTTAATGGCATCATACCAATATCTTTTGGCTTTCTTGTTAATCTTTCTTACCTTGATATGTCTGGAAATTTTTTGGCTGGTCCTGTTCCGTCGGGTTTAGGGACTCTTTCCAGGTTAAAGTATTTGAACCTTTCTGGTAATGACCTAAGTTCTTTGCCTGCACAATTGGGGGGTCTTACTAGCTTGGTTGACCTTGATCTTAGTGGGAATTATTTTTCTGGTGGTGTTTTTCCGGATTTGAAAGGGTCGAGGAACTTGCGGAGATTGATGCTTGGAAACAGCATGCTCAATGGACCATTGCCGGCAGAATTGTTTACTGTTTCATTGCAGTTGCAGATCATTGTGTTGAGGAAAAACAATTTAACTGGTTCTTTGCCTGTTGAGTTTTGGTCTCTGCCGAGTTTGACTTTCGTTGATGTGTCTTCCAATAGCTTCAGTGGGTTGCTTCCGGGTTCAAGTTCTGCCGTCAATTCTACTGTTGCGGCGCTCAATATTTCTCATAACATGTTTTATGGAAATCTGACACCTGTCCTCAGAAGGTTTAGTTTTGTTGATCTTTCAAACAATTATTATGAGGGAAAGGTTCTGGATTTCATGCATAATGTATCAATAAATAGTAATTGCCTACAGAACGCGACAAATCAGAAGTCAACGGGGGAATGTGCGTCATTTTACATAGAGAGGGGCCTCAGTTTTGATGATTTTGGACGTCCGAACACGACAAAACTCGCTACTGAAGGTTCTGGAAAGAGTAATAAAACTAAGATTATATTGGCGGGAGTCTTGGGTGGACTTGGTTTAATTGCACTTTTGGCTTTGCTTCTGGTACTGTTTCTTTTGTGCACACGTAAGAGGGGTAATACAAATCAAAGGGGAAATGGTGTGGGCCCTGCTCCGGCCGGAGGCAGTCCTCCGCCTCCTGGTGTATTGGTAAACCTTGCAAATGTAGGAGAGTCATTTACGTATCATCAGTTGCTTCAGGCAACGGGAGATTTCGGCGATGCAAATCTTATAAAGCATGGCCACACTGGGGATTTCTTCAAAGGTGTTTCAGAAAATGGGATTCCCGTTGTCATCAAAAGGATTGACATGCGATCTATGAAAAAGGATGCTTACTTATCGGAATTGGAATTTTTTAATAAGGTTTCTCATCAGAGATTTGTTCCCTTATTAGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACATATGCCAAAAGGTGACTTGTCTAATTGCTTGTTCTTCAAAAACGCCACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACTAGGTTAAAGATTGCTACCGGAGCAGCAGAAGCCGTATCATATCTGCATTATGAATGTATTCCACCTATCGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTCGATGACAAATATGAAGTTCGGTTAGGAAGTTTAAGTGAATCCTGTGTTCAAGAAGGTGATACCCATCAAAATAAAATCACCCGGTTTCTGCGATTGCCTCAGTCCTCTGAACAAGGCGCATCTGGTTCATCAACATCAGTTTGTACCTATGACGTTTATTGCTTTGGGAAAGTGTTACTTGAACTGGTGACTGGTAAGCTGGGAATTAGTGCATCCAGTGATAGCGAATTAAAGGAATGGCTTGATCAAATTCTACCTTGCATTAGCATGTATGACAAGGAGCTTGTGACAAAAATCGTCGACCCGTCTCTGGTCTTGGACGAGGATTTCTTAGAGGAAGTGTGGGCAATAGCCATTGTCGCCAGGTCTTGCCTAAACCCGAAACCTTCAAGACGACCGCCAATGCGATATGTTCTCAAGGCATTGGAAAGCCCATTTAAAGTTGTAAGGGAAGAAAGTTTAAGTTCTGCGCGGCTTAAAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACTTTGTTTGGTAGTTGGCGTCAGAGTTCATCTGATGTAACAACAATCCCGGCAACTTCTGGTACAAAGTTAGAAGGAACTAGTAGTTTGAAGCTTTCAGCAACTAGTAGTTCATCATCGCGGAGACGTCATTCAAACGAGATATGTCCAGAGCCATATGGCTTACCTGATGTAGAGAGGCTGGAGCATGAAGGAATATAG 2679 0.4125 MVDRRGIVWFLLLLFFLCFEVTLEQIEPLSSPKERAALLQLRTSLGLRSKEWPRKPDPCLIWIGITCQNGRVVGINISGFRRTRIGRRNPQFSVDALVNFTLLQSFNASKFYLPGPIPDWFGLSFNSLRVLDFRYCSIINAIPNTLGNLTSLNVLYLSDNNLTGNVPHSLGQLSGLSVLDLSRNSLNGIIPISFGFLVNLSYLDMSGNFLAGPVPSGLGTLSRLKYLNLSGNDLSSLPAQLGGLTSLVDLDLSGNYFSGGVFPDLKGSRNLRRLMLGNSMLNGPLPAELFTVSLQLQIIVLRKNNLTGSLPVEFWSLPSLTFVDVSSNSFSGLLPGSSSAVNSTVAALNISHNMFYGNLTPVLRRFSFVDLSNNYYEGKVLDFMHNVSINSNCLQNATNQKSTGECASFYIERGLSFDDFGRPNTTKLATEGSGKSNKTKIILAGVLGGLGLIALLALLLVLFLLCTRKRGNTNQRGNGVGPAPAGGSPPPPGVLVNLANVGESFTYHQLLQATGDFGDANLIKHGHTGDFFKGVSENGIPVVIKRIDMRSMKKDAYLSELEFFNKVSHQRFVPLLGHCLENENEKFLVYKHMPKGDLSNCLFFKNATSEDGTLQSLDWITRLKIATGAAEAVSYLHYECIPPIVHRDIQASSILLDDKYEVRLGSLSESCVQEGDTHQNKITRFLRLPQSSEQGASGSSTSVCTYDVYCFGKVLLELVTGKLGISASSDSELKEWLDQILPCISMYDKELVTKIVDPSLVLDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALESPFKVVREESLSSARLKATSSRGSWNATLFGSWRQSSSDVTTIPATSGTKLEGTSSLKLSATSSSSSRRRHSNEICPEPYGLPDVERLEHEGI 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03381 892 MobiDBLite consensus disorder prediction 838 882 - -
Car05g03381 892 SUPERFAMILY Protein kinase-like (PK-like) 499 798 IPR011009 -
Car05g03381 892 SMART LRR_typ_2 317 340 IPR003591 -
Car05g03381 892 SMART LRR_typ_2 173 196 IPR003591 -
Car05g03381 892 SMART LRR_typ_2 149 172 IPR003591 -
Car05g03381 892 SMART LRR_typ_2 221 244 IPR003591 -
Car05g03381 892 Gene3D Phosphorylase Kinase; domain 1 495 592 - -
Car05g03381 892 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Car05g03381 892 PANTHER BNAA07G03560D PROTEIN 185 845 - -
Car05g03381 892 PANTHER BNAA07G03560D PROTEIN 8 188 - -
Car05g03381 892 ProSiteProfiles Protein kinase domain profile. 517 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03381 892 Pfam Protein tyrosine and serine/threonine kinase 523 755 IPR001245 GO:0004672|GO:0006468
Car05g03381 892 Gene3D Transferase(Phosphotransferase) domain 1 593 816 - -
Car05g03381 892 PANTHER RECEPTOR-LIKE PROTEIN 55 185 845 - -
Car05g03381 892 PANTHER RECEPTOR-LIKE PROTEIN 55 8 188 - -
Car05g03381 892 Gene3D Ribonuclease Inhibitor 292 396 IPR032675 -
Car05g03381 892 Gene3D Ribonuclease Inhibitor 190 291 IPR032675 -
Car05g03381 892 MobiDBLite consensus disorder prediction 838 869 - -
Car05g03381 892 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Car05g03381 892 PRINTS Leucine-rich repeat signature 176 189 - -
Car05g03381 892 PRINTS Leucine-rich repeat signature 221 234 - -
Car05g03381 892 SUPERFAMILY L domain-like 93 389 - -
Car05g03381 892 Pfam Leucine rich repeat 151 208 IPR001611 GO:0005515
Car05g03381 892 Pfam Leucine rich repeat 220 256 IPR001611 GO:0005515
Car05g03381 892 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03381 Car-Chr5 78411746 78416794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03381 34 690 Miscellaneous Gene Families AT2G16250 55.940 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Car05g03381 PK_Tyr_Ser-Thr 4.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03381 - - gmx:100805769 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03381 05 78411746 78416794 Car05g03381 05 78411746 78416794 ECH