Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03376 ATGGCTTCAAATTCAGATGCCAATTCTccaacaccatctccacccgattcatctccgccaccgccaccagccggcgataattcatcgccaccgccaccgccaccgaccgGTGATAATTCATCGCCGCCACCACCATCAACACCGACTGGCGATAATTCATCGccgccgccgccatcaccccctccaccggcctcatcacctccgccgccgcctcctcctccAAACCGACAAGTATTTTCTCCTCCTCCTCCGCCGTCACATCATCGGTTGTTGCCACCAACGTCATCAAGTTGGAATAACAACCACAGTAGACATGAAGATAGTGGAAACCAATTGAGCGCGGCAGCTATAATAGGAATTGTAGGTGGAGTTGGGTTATTGCTCCTTGTCATTATCATACTCTGCATTGTTTGTTCAATAAAGAAGAAGAAGAAATCACAAAGTCCCATTCATTACTACCCCAACCAACCTGGCGCTCGAAATCAATATGTGGAACACATTGTTAATATGCCAGCAGCACCTCCAGGTGGAGGTTGGGGTCCAGCACCTTTACCTCCTCAATGGGTGGGCAGTGACTTAAGCAGCTCTAGTTACTCTGGGCCCCATGGTCCAGTATTACCACCACCACACCCAACAGTAGCACTTGGATTCACCCAAAACTCTTTCACACATGACGACTTATCAGTAGCCACTGGTGGGTTTGCACAACGAAACTTGTTGGGTCAAGGTGGGTATGGATATGTATATAAAGGTGTTCTCCCTAATGGTAAGGAAATTGCTGTCAAGAGTCTCAAATCCACTGGTGGACAAGGTGACAGAGAATTCCAAGCTGAGGTTGATATTATCAGTCGTGTCCATCATCGATATCTTGTCTCACTTGTTGGTTGTTGCATTTCTGATACTAAGAAGCTTCTCGTTTATGAATTTGTTCCCAACAAGACACTTTATTATCACCTTCATGGGAAAGGTCGACCTGTGATGGATTGGGGCACAAGGCTTAAAATTGCAATTGGATCTGCCAAAGGACTTTCTTATTTACATGAGGATTGTCACCCTCGAATCATTCACAGAGACATAAAGTGTGCAAACATTTTACTTGAAAACAACTTTGAAGCCAAAGTGTCAGATTTTGGATTGGCAAAGTTTACTCAAGACAACAACACTCATGTTTCTACTCGTGTCATGGGAACATTTGGGTATATGGCTCCTGAGTATGCTTCGAGCGGTAAGCTAACCGATAAATCCGATGTCTTCTCGTACGGTATTATGCTTTTGGAGCTTATAACCGGACGACGACCGCTTGGTACCCGCGGTGATTATGAAGACAATTTGGTTGATTGGGCTAGACCACTTTGTACAAAAGCATTGGAAAATGAAACATTTGAAGGATTGGTAGATCCACGTTTAGAGGACAATTATGATAAACAGGAGATAGCACGTATGGTAGCTTGTGCTGCTGCTAGTGTTAGACACTCAGCAAGAAGGCGTCCAAGAATGAGTCAGATTGTTCGGGTACTGGAGGGAGATGCAGTACTAGAAGTCCTTAATCAGGATGGAGTGAAACCTGGAGAGAGTGCTTTGTATAGTAGCATAAGTGGAGATTATGATGCAGGGGCATATAGTGCTGACATGAAAAAGTTCAGGAAACTAGCATTGGACAGTGGTGTTGCAAGTAGTGAGTTTGGTGGAACGAGTGAGTATGGTCTTAACCTTTCCATTTCAAGTAGTGAACAATCTTCAGCTGAATATAGCATGAAGATTGGAACTGGAATTGGAAGTCGGATGAACACTCCTGAGAAGCAAGCTTCTTCTAATGTGATGTAA 1824 0.3997 MASNSDANSPTPSPPDSSPPPPPAGDNSSPPPPPPTGDNSSPPPPSTPTGDNSSPPPPSPPPPASSPPPPPPPPNRQVFSPPPPPSHHRLLPPTSSSWNNNHSRHEDSGNQLSAAAIIGIVGGVGLLLLVIIILCIVCSIKKKKKSQSPIHYYPNQPGARNQYVEHIVNMPAAPPGGGWGPAPLPPQWVGSDLSSSSYSGPHGPVLPPPHPTVALGFTQNSFTHDDLSVATGGFAQRNLLGQGGYGYVYKGVLPNGKEIAVKSLKSTGGQGDREFQAEVDIISRVHHRYLVSLVGCCISDTKKLLVYEFVPNKTLYYHLHGKGRPVMDWGTRLKIAIGSAKGLSYLHEDCHPRIIHRDIKCANILLENNFEAKVSDFGLAKFTQDNNTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSYGIMLLELITGRRPLGTRGDYEDNLVDWARPLCTKALENETFEGLVDPRLEDNYDKQEIARMVACAAASVRHSARRRPRMSQIVRVLEGDAVLEVLNQDGVKPGESALYSSISGDYDAGAYSADMKKFRKLALDSGVASSEFGGTSEYGLNLSISSSEQSSAEYSMKIGTGIGSRMNTPEKQASSNVM 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03376 607 MobiDBLite consensus disorder prediction 1 107 - -
Car05g03376 607 Gene3D Phosphorylase Kinase; domain 1 211 309 - -
Car05g03376 607 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 5 559 - -
Car05g03376 607 PRINTS Proline rich extensin signature 32 44 - -
Car05g03376 607 PRINTS Proline rich extensin signature 7 23 - -
Car05g03376 607 PRINTS Proline rich extensin signature 51 72 - -
Car05g03376 607 MobiDBLite consensus disorder prediction 12 90 - -
Car05g03376 607 MobiDBLite consensus disorder prediction 91 107 - -
Car05g03376 607 Gene3D Transferase(Phosphotransferase) domain 1 310 517 - -
Car05g03376 607 ProSiteProfiles Protein kinase domain profile. 234 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03376 607 Pfam Protein tyrosine and serine/threonine kinase 237 505 IPR001245 GO:0004672|GO:0006468
Car05g03376 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Car05g03376 607 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 5 559 - -
Car05g03376 607 SMART serkin_6 234 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03376 607 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
Car05g03376 607 SUPERFAMILY Protein kinase-like (PK-like) 215 506 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03376 Car-Chr5 78365245 78368414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03376 61 584 Trihelix Transcription Factor Family AT1G70460 45.591 9.09e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car05g03376 PK_Tyr_Ser-Thr 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03376 - - cam:101505888 932.939