Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03339 ATGAAAATAAGGTTGTTGCAGGAACTGTTGGCTGAAGGGGACACTGTGCGTACGGTAGTAAAATTCCTTTCTCACGAGCTTTCTAAAGAAAGAGAGGAGGCTGTCTCCTTGCTTTATGAACTCTCAAAATCTGAAACCCTCTGTGAGAAGATTGGTTCAATCAATGGATCTATTCTTATATTAGTTGGAATGACAAGCAGCAATTCAGAAGACCTTTCCACTGTTGAGAAGGCTGATAAAACATTGGAGAATCTGGAAAAATATGAGAATAATGTGCGGCAGATGGCTGAAAATGGTAGATTGCAGCCTCTTCTGACTCATCTTCTTGAAGGTCCACCAGAAACTAAACTGTCCATGGCTGGAATCCTTGGCGAGCTGGTTTTGGACAATGATGTTAAAGTCTTTGTTGCTAGAACTGTAGGCTCATCTCTGATCAGTATCATGAAAAGTGGCAATATGCAGTCAAGAGAAGCTGCACTAAAGGCACTAAATCAGATATCATCATGTGAGCCAAGTGCAAAGGTTTTACTAGAAGCCGGAATACTTTCCCCTCTTGTCAATGACCTTTTTGCAGTGGGCCCTCATTTGCTTCCGACACGACTAAAAGAGGTATCTGCTACAATTCTTGCCAGTGTTGTGAATTCGGGAGAAGACTTTGATTCGATTCCACTTGGACCTGATCACCAAACTCTGGTCTCGGAGGATATAATTCATAAACTACTCCATCTTATAAGCAACACTGGTCCAGCAATTGAGTGTAAACTTCTCCAAGTTCTTGTTGGACTTGCTAGTTCTCCAACTACAGTGCTGAGTCTTGTTGCTGCTATCAAAAGCTCTGGTGCCACTATCAGTCTAGTTCAATTCATCGAGGCACCACAGAAAGATCTTCGTTTAGCTTCCATAAAACTTCTTCAGAATTTGTCTCCCCACATGGGCCAGGAATTAGCCGACGCGCTTCGTGGCTCTGTGGGACAACTTAGTAGTCTAGTTAAAGTCATATCAGAAAATATAGGAATCACTGAAGAGCAGGCAGCTGCTGTTGGCCTCTTAGCCGATCTACCCGAGAGGGATTTGGGCCTCACGAGACAGCTACTTGATGAAGGGGCTTTTCTGATGGCCATATCAAAGGTTATTGCCATCAGACAGGGAGAGATCAGAGGCACTCGGTTCGTGACACCATTTCTTGAAGGACTTATGAAGATTGTTGCAAGGATTACATATGTCTTGGCCGATGAGCCTGATGCCGTCGCACTATGCCGTGATCAAAATCTTACTGCACTCTTCATTGAACTGCTTCAGACCAATGGGCTTGACAATGTACAGATGGTTTCTGCTACAGCTTTGGAGAATTTATCGCTAGAATCAAAGAGTTTAACCAAATTGCCTGAGGTGCCAGAACCGGCCTTTTGTGCTTCATTCTTTTCATGTTTCAGCAAACCGCCAATCGTCACCGGATTATGTAGGATCCACCGTGGGAAGTGTTCATTAAAAGAAACATTTTGTCTTTACGAAGGACAGGCAGTCCTAAAATTAGTAGCTCTACTGGACCACACAAATGTGAATGTGGTTGAGGCATCCCTTGCAGCCTTATGTACTCTAATAGACGATGGAGTAGATATTGAGCAAGGAGTATTGGTTTTGTGCGATGCGGAGGGAGTGAAGCCTATAATTGGTGTGTTGCTCGAGAAACGGACAGAAAATTTGAGGAGGAGGGCAGTTTGGGCAGTGGAAAGACTGTTGCGAACGGATGATATAGCCTATGAAGTTTCCGGAGATCAAAATGTGAGTACTGCACTTGTGGACGCGTTCCAACATGGTGATTATCGAACTAGGCAGATCGCTGAGCGTGCCTTGAAGCATGTTGATAAGATACCCAACTTCTCGGGAATCTTTCCAAACATGTGA 1905 0.4404 MKIRLLQELLAEGDTVRTVVKFLSHELSKEREEAVSLLYELSKSETLCEKIGSINGSILILVGMTSSNSEDLSTVEKADKTLENLEKYENNVRQMAENGRLQPLLTHLLEGPPETKLSMAGILGELVLDNDVKVFVARTVGSSLISIMKSGNMQSREAALKALNQISSCEPSAKVLLEAGILSPLVNDLFAVGPHLLPTRLKEVSATILASVVNSGEDFDSIPLGPDHQTLVSEDIIHKLLHLISNTGPAIECKLLQVLVGLASSPTTVLSLVAAIKSSGATISLVQFIEAPQKDLRLASIKLLQNLSPHMGQELADALRGSVGQLSSLVKVISENIGITEEQAAAVGLLADLPERDLGLTRQLLDEGAFLMAISKVIAIRQGEIRGTRFVTPFLEGLMKIVARITYVLADEPDAVALCRDQNLTALFIELLQTNGLDNVQMVSATALENLSLESKSLTKLPEVPEPAFCASFFSCFSKPPIVTGLCRIHRGKCSLKETFCLYEGQAVLKLVALLDHTNVNVVEASLAALCTLIDDGVDIEQGVLVLCDAEGVKPIIGVLLEKRTENLRRRAVWAVERLLRTDDIAYEVSGDQNVSTALVDAFQHGDYRTRQIAERALKHVDKIPNFSGIFPNM 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03339 634 SUPERFAMILY ARM repeat 229 621 IPR016024 -
Car05g03339 634 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 43 7 633 - -
Car05g03339 634 Gene3D - 5 130 IPR011989 -
Car05g03339 634 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 633 - -
Car05g03339 634 SUPERFAMILY ARM repeat 7 266 IPR016024 -
Car05g03339 634 Coils Coil 78 98 - -
Car05g03339 634 Gene3D - 132 308 IPR011989 -
Car05g03339 634 Gene3D - 395 623 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03339 Car-Chr5 78102971 78108060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03339 9 634 U-box Gene Family AT1G76390 66.561 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03339 - - gmx:100815928 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03339 05 78102971 78108060 Car05g03339 05 78102971 78108060 ECH