Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03336 ATGGAAGCAGAGCATGAATATGATAGTTGTTCAAATTCAAATGGAGGTTTCCTTTATGTGAAAGTGATGACTGACGAACAAATGGAAGTTCTTAGGCAACAGATAGCTGTCTACACTTCCATATCTGATCACCTTGTTCAGATGCACAAATCCATCACCTCTCAACACGACCTCTCTGGATTGAGGCTGGGTAATTTGTATTGTGATCCATTGATGGCATGCTCTGGACACAAGATAAGTTCCAGGCAACGTTGGACTCCAACCCCTCTCCAGCTTCAAATACTCGAGCGGATTTTCGATGAAGGCAATGGAACTCCCACCAAGCAGAAGATCAAAGATATAGCCATTGAACTCGGTCAGCACGGCCAAATTTCTGAGACTAATGTTTATAATTGGTTTCAGAACAGAAGAGCTCGTTCCAAGCGCAGGCAATTGGTTTCTACAATAAATCAAACAGAGCCAGAGGCTGAGATAGAAGTTGAGTCTCCTAAAGAGACTCAAACACTTGAAGAAACTGATCAAGTTCAATTCTTTCAGAATTTATCGCCTCATAGGGTCAAGGATATGTACATTCAGAGTCCTGACATAGGATTTGACCAGTTGTTGGGTAAAATTGAAATTGCAGGTAGCTATAGTTCTTACTTTCTTTGA 651 0.4132 MEAEHEYDSCSNSNGGFLYVKVMTDEQMEVLRQQIAVYTSISDHLVQMHKSITSQHDLSGLRLGNLYCDPLMACSGHKISSRQRWTPTPLQLQILERIFDEGNGTPTKQKIKDIAIELGQHGQISETNVYNWFQNRRARSKRRQLVSTINQTEPEAEIEVESPKETQTLEETDQVQFFQNLSPHRVKDMYIQSPDIGFDQLLGKIEIAGSYSSYFL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03336 216 SUPERFAMILY Homeodomain-like 81 144 IPR009057 -
Car05g03336 216 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Car05g03336 216 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 216 IPR044559 GO:0003700
Car05g03336 216 CDD homeodomain 82 144 IPR001356 GO:0003677
Car05g03336 216 Pfam Homeodomain 82 142 IPR001356 GO:0003677
Car05g03336 216 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 216 - -
Car05g03336 216 Gene3D - 83 147 - -
Car05g03336 216 SMART HOX_1 80 147 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03336 Car-Chr5 78082844 78084750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03336 18 214 Wox Gene Family AT4G35550 50.442 7.92e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car05g03336 Homeodomain 3.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03336 - - gmx:100820530 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03336 05 78082844 78084750 Car05g03336 05 78082844 78084750 ECH