Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03324 ATGGAAGATGGTGCTTTGACATCATCTACAACCATGATGGAAGCTCCACAACCTGATGAAAATTCAATGGATTTTGATTACGTGAGTGAACTTTTGTTAGATGGTTGTTGGTTAGAAGCATCTGCTGATGGATCTGATTTCTTGCTACAAAGTTCACCTTTTTCCAATCCCCTTTTTGACCCTTCATTCACTTGGCCTTCCTTGGACAACATTGACCCTCCCGATAACGTGGATCGACATAAATCGCAAGATGCTTCTCTTGGCACCGAACAAGAAAGCCGAAGTATAGTTAATGTCGATGGTGGTAGCAACCAGAAGGAGTATCGATTTGAGACTTATTCAGGTGAAGGGTTTTTTAGTAGGTGGTGGATTGGACCAACACCGAATTCGGGACCTGGTGGATCTTTCATAGTGGAGAAGCTGATAAGGGCTCTTAAGTGGATCAAAGATTTCGATAGAAACAAAGATATGCTTATACAAATTTGGGTGCCGGTTAATAGAGGGGATGATAGGCCATTTCTGACAGCTAATGATCTTCCTTTTTCACTCGAAACAAGGTCTTTAAACCTTGCAAGGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCGGAGGAGGAGGACTCGAAGGATTTGGTGGCGGGTTTGCCTGGTCGAGTATACAGGGATAAAGTTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCACGAGTTGATCATGCTCAAGAATGTGATATTCATGGAACATTAGCAGTACCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGTGTTATTGAGGTTGTGATGACTACACAGCAAAGCAACTATAGCGCCGAACTTGAGACTGTTTGCAAAGCACTTGAGGTTGTTGATCTCAGAAGCTCTAGACATTCAAGTCTTCAGAATGTGAAGGCACGCGACAGATCCTATGAAACCGCACTACCTGAGATTCAAGAGGTTTTGAGATCTGCATGTGAAATGCACAAATTACCTTTGGCTCAGACTTGGATCCCATGCATCCAACAAGGAAAAGACGGGTGTCGGCACTCGGATGATAACTATGTACACTGTATATCTCCGGTGGAGTATGCTTGCTATATCGGTGATTCCTCGGTAAGGTTTTTTCACGAGGCTTGCATGGAGCATCACTTGTTAAAAGGTCAAGGTGTTGCTGGGGGTGCTTTTATGACAAACCAACCATGCTTCTCGGCTGATATAACTTCTTTAAGCAAGATCGATTATCCACTGTCTCATCATGCCAGGTTGTTCGGATTGCGGGCTGCAGTTGCCATACGACTCCGAAGCATATATAGTACTTCAGATGACTATGTTCTTGAGTTCTTCTTGCCTGTGGATTGTAATGACAGCGGGGAACAGAAAAAGATGCTCACTTCATTGTCCATGATTATTCAAAGGGTTTGCCGCAACTTGCGGGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCAGCAAATGAAGTGATGGACCTTGCTGATAGTGGTTTTGCTAGCGGTGCAACTTGGTCGGAACTCCAACACAGGAGGATGGCTGCCTCATTGGATGGTGATTTTTTTTTTAATGAAACAATGGGTGGAAAATTCTCAGAACAGACGCAGCAACAAGAAAATCTTATTTTAAAAGGAGATACTGAGTCTGGTAGAGAATGTTCCCTTTCTGTTGAGGGTAACTTGTTGTCAAGTGTGGGAATAAGAGAGAAAAGACGTCCCAAGGCAGATAAAACTATCACTCTTCAAGTTCTTAGGCAATATTTTGCCGGAAGTCTAAAAGATGCTGCGAAGAATATTGGTGTCTGTACTACAACTCTGAAAAGGATCTGCCGGCAACACGGGATAAAGCGTTGGCCTTCCCGGAAGATAAAAAAGGTCGGCCATTCCTTGCAGAAACTTCAACTTGTCATCGACTCGGTTCAGGGTGCCTCGAGTACATTTCAAATTGATTCCTTCTATTCAAAATTATCCGATCTAGCATCACCAAATTTATCAGGAACCAGCCTGATCTCAACTCTGAATCAAATCGATAATCAAGTCTCATTAAACACACAGCCGGATCCCGACTCGTTGAGTCCAGAAGATGCATCAAAATCACCCTCCACTTCGTGCAGTCAAAGTTCATTTTCAAGCCATTCCTGTTCAAGCATGTCAGAGCAACAACACCACACAAACAATTTTGCTAGTAACAAAGACCCATTGGTTGGCGAAGATTCTGTTGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAATAAGGCGAACGTCATGCCAAGATCACAAAGCCATGAAACACTTGGTGAACACCCGATAACCGAGTATCACCAATCTTTATTGAAAACCGATCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACGTATGGAGATGAGAAAAGCCGGTTTAGGATGCCAAAGACATGGTGTTATGAAGATGTTGTGCAGGAAATTGGCAGGAGATTTAATGTAAGTGACATGAGCAAATTCGATATCAAATATTTGGACGATGATTGTGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTGTCAATCTTCTGAGATTAGTACCATCAAACTCTGTCTACAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG 2715 0.4228 MEDGALTSSTTMMEAPQPDENSMDFDYVSELLLDGCWLEASADGSDFLLQSSPFSNPLFDPSFTWPSLDNIDPPDNVDRHKSQDASLGTEQESRSIVNVDGGSNQKEYRFETYSGEGFFSRWWIGPTPNSGPGGSFIVEKLIRALKWIKDFDRNKDMLIQIWVPVNRGDDRPFLTANDLPFSLETRSLNLARYREISVRYQFSAEEEDSKDLVAGLPGRVYRDKVPEWTPDVRFFRSDEYPRVDHAQECDIHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYSAELETVCKALEVVDLRSSRHSSLQNVKARDRSYETALPEIQEVLRSACEMHKLPLAQTWIPCIQQGKDGCRHSDDNYVHCISPVEYACYIGDSSVRFFHEACMEHHLLKGQGVAGGAFMTNQPCFSADITSLSKIDYPLSHHARLFGLRAAVAIRLRSIYSTSDDYVLEFFLPVDCNDSGEQKKMLTSLSMIIQRVCRNLRVITNKELEKNNLSANEVMDLADSGFASGATWSELQHRRMAASLDGDFFFNETMGGKFSEQTQQQENLILKGDTESGRECSLSVEGNLLSSVGIREKRRPKADKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASSTFQIDSFYSKLSDLASPNLSGTSLISTLNQIDNQVSLNTQPDPDSLSPEDASKSPSTSCSQSSFSSHSCSSMSEQQHHTNNFASNKDPLVGEDSVDVVLKRIRSEAELKSLIQDNNKANVMPRSQSHETLGEHPITEYHQSLLKTDRKASQKEDAHRVKVTYGDEKSRFRMPKTWCYEDVVQEIGRRFNVSDMSKFDIKYLDDDCEWVLLTCDADLEECIDVCQSSEISTIKLCLQPSSNFIRSSLEFR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03324 904 MobiDBLite consensus disorder prediction 690 742 - -
Car05g03324 904 Gene3D - 811 892 - -
Car05g03324 904 ProSiteProfiles PB1 domain profile. 810 893 IPR000270 GO:0005515
Car05g03324 904 Pfam RWP-RK domain 588 636 IPR003035 -
Car05g03324 904 MobiDBLite consensus disorder prediction 73 87 - -
Car05g03324 904 Pfam PB1 domain 811 892 IPR000270 GO:0005515
Car05g03324 904 PANTHER PROTEIN NLP4 20 900 - -
Car05g03324 904 SUPERFAMILY CAD & PB1 domains 804 895 - -
Car05g03324 904 CDD PB1_NLP 811 892 IPR034891 -
Car05g03324 904 ProSiteProfiles RWP-RK domain profile. 573 656 IPR003035 -
Car05g03324 904 Gene3D - 183 295 IPR029016 -
Car05g03324 904 PANTHER PROTEIN NLP8 20 900 IPR045012 GO:0003700
Car05g03324 904 SMART PB1_new 810 893 IPR000270 GO:0005515
Car05g03324 904 MobiDBLite consensus disorder prediction 1 21 - -
Car05g03324 904 MobiDBLite consensus disorder prediction 70 94 - -
Car05g03324 904 MobiDBLite consensus disorder prediction 1 17 - -
Car05g03324 904 MobiDBLite consensus disorder prediction 690 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03324 Car-Chr5 77952376 77957262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03324 1 895 NLP Transcription Factor Family AT1G20640 46.456 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car05g03324 PB1 7.5e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03324 - - gmx:100785135 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03324 05 77952376 77957262 Car05g03324 05 77952376 77957262 ECH