Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03305 ATGAAGCTCAATTTCGCGGGAGGAGTAAGTGCTCTATGCACTCTGCTTCTTTGTCTTGCTATTTCTCTTTTCCACATTACTGAAGCTGAAGATCCCTATAGATTCTTCAACTGGAATGTTACTTATGGAGACATTTACCCACTTGGAGTTCGCCAAAGGGGTATATTGATCAATGGACAATTTCCCGGTCCAGACATTCATTCTGTTACAAACGACAACCTCATCATCAATGTCTTCAACAGTTTGGATGAACCCTTTCTCATCTCTTGGAATGGTATACAGCAGAGAAGAAACTCATTCGAAGATGGTGTTTTTGGAACAACATGCCCCATCCCACCAGGGAGGAACTTTACTTACATACTTCAAGTGAAGGATCAAATTGGAAGCTTTTACTATTTTCCATCTCTTTCATTTCACAAAGCAGCTGGTGGTTTTGGTGGCATTAGGATACTCAGTAGGCCCAGAATTCCAGTCCCTTTTCCTGATCCTGATGGTGATTACACTGTCCTTATTGGAGATTGGTACAAATCCAACCATACGACTCTGAAAGCTCATCTTGATAAGGGAAAGAAGTTGCCTATTCCTGATGGAATCCTCATCAATGGTCGTGGACCTAATGAGATATCTTTCAACGTAGAACAAGGAAAGACTTACAGGCTTAGGATATCAAATGTGGGATTGCAACATTCCCTTAACTTCCGCATTCAGAATCACAAATTGAAGCTTGTAGAAGTGGAAGGAACACACACACTTCAAACTACTTACTCATCACTTGATGTTCATGTGGGGCAATCTTATTCAGTGCTAGTAACTGCAGATCAACCTTCTCAAGATTACTACATTGTGGTTTCCACAAGATTCTCCTCTAAGATTCTCACCACCACTGGAGTACTTCGATATAGCAACTCTGCAGGCCCGGTATCTGGCCCACCTCCTGGTGGACCTACAATTCAAATTGATTGGTCTTTGAACCAGGCCCGATCGATCAGGACTAACCTTACAGCAAGTGGACCTAGGCCTAATCCACAAGGGTCCTACCATTATGGTCTCATAAACACAACAAAGACCATCATTCTGTCTAGTTCTCCTGGTCAAGTTAATGGCAAGCAAAGATATGCAATTAACAGTGTGTCTTATGTTGCCCCGGACACTCCTCTTAAGCTTGCCGACTACTTCAAAATCTCCGGTGTTTTTCGTGTCGGAAGCATATCTGACAGACCCACTGGTGGTGGCATCTATCTCGACACATCTGTCCTGCAAGCTGATTACCGATCTTTCGTCGAGATTGTCTTCCAAAACAACGAAAACATCATTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACCACTGCTAGCAGAAACCAGTATAATCTCCGAGACGCGGTGGCGCGTTGCACCACTCAGGTATATCCCTATTCATGGACTGCTATTTATGTTGCACTGGACAACGTTGGAATGTGGAACTTGAGGTCCGAATTTTGGGCACGACAGTACCTTGGCCAACAATTTTATCTGCGCGTTTACACGACATCAACTTCAATCAGAGACGAATTTCCTATTCCAAAGAACGCGCTTCTCTGCGGCAAGGCGAGCGGGAGACACACTCGACCCATTTGA 1647 0.4402 MKLNFAGGVSALCTLLLCLAISLFHITEAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGIQQRRNSFEDGVFGTTCPIPPGRNFTYILQVKDQIGSFYYFPSLSFHKAAGGFGGIRILSRPRIPVPFPDPDGDYTVLIGDWYKSNHTTLKAHLDKGKKLPIPDGILINGRGPNEISFNVEQGKTYRLRISNVGLQHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPSQDYYIVVSTRFSSKILTTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILSSSPGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRVGSISDRPTGGGIYLDTSVLQADYRSFVEIVFQNNENIIQSYHLDGYSFFVVGMDGGQWTTASRNQYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTTSTSIRDEFPIPKNALLCGKASGRHTRPI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03305 548 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Car05g03305 548 Gene3D - 349 545 IPR008972 -
Car05g03305 548 CDD CuRO_1_AAO_like_1 35 150 IPR034273 GO:0005507
Car05g03305 548 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 12 541 - -
Car05g03305 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Car05g03305 548 Gene3D - 33 154 IPR008972 -
Car05g03305 548 SUPERFAMILY Cupredoxins 29 180 IPR008972 -
Car05g03305 548 PANTHER MULTI-COPPER OXIDASE 12 541 IPR045087 -
Car05g03305 548 Gene3D - 163 338 IPR008972 -
Car05g03305 548 CDD CuRO_3_AAO_like_1 382 502 IPR034275 GO:0005507
Car05g03305 548 Pfam Multicopper oxidase 166 302 IPR001117 -
Car05g03305 548 Pfam Multicopper oxidase 384 520 IPR011706 GO:0005507|GO:0016491
Car05g03305 548 SUPERFAMILY Cupredoxins 160 340 IPR008972 -
Car05g03305 548 CDD CuRO_2_AAO_like_1 165 300 IPR034271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03305 Car-Chr5 77757557 77765037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03305 - - gmx:100776222 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03305 05 77757557 77765037 Car05g03305 05 77757557 77765037 ECH
Car04g03620 04 65651079 65654169 Car05g03305 05 77757557 77765037 PCT