Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03303 ATGGCTACCCTAAACGAACCCTTGCAATATCCCTCTACTCGCAGAGACGACTCTATCGTCGATCACTATCACGGCGTCAAAATCTCCGACCCCTATCGATGGCTCGAAGATCCTGATGCTGAAGAAGTGAAAGAGTTTGTTGAAAAACAAGTTCAACTCACCAATTCCGTGATTAAAAAATGCGAAACTAGACCAAAGCTTAACGAAACAATCACAAAGCTATTTGATCATCCTCGTTATGATGCTCCTTTTAAACGAGCTGACAAGTACTTTTACTTCCATAACACTGGTCTTCAGCCACAGAACATTCTCTATGTTCAGGACAGCTTGGAGGGAGAGCCAGAGGTTTTGCTTGACCTTAATGCTTTAAGCGAGGACGGAACTGTAGCGTTGAGCACATATTCAGTGAGTGAAGATGCCAAGTACCTGGCTTATGCGCTAAGTTCCAGCGGTAGCGATTGGGTGACTATAAAAGTTATGCATATCAAGGACCAAAATGTTGAGCCTGATACTTTATCATGGGTTAAATTTTCCTCCATTAGTTGGACACATGATAGCAAAGGATTCTTTTATAGCCGCTATCCAGCACCCAAAGAGGGAGAAGTGGTAGATGCTGGGACTGAAACAAACTCTAACCTTTATCACGAGCTCTATTATCATTTTCTGGGTACGGATCAATCAGAAGATATTTTGTGCTGGAAAGATCTTGCAAACCCTAAATATACTGTGGGGGGAGTTGTTACTGATGATGGGAAGTATCTCCTCCTCTATATTGGAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTATGACATGTATGATCAACCCAGCGTACTGGAAAACTTTCGGAGTGAAAACTCCCCCCTCCCTTTCGTCAAACTAATCGATAATTTTGATGCAAAGTATGATTACATTGCAAATGATGACACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAGAAACCAAACGCTTGGGCTGATGTTCTCCGAGAGTCTGAAAAAGATGTACTTGAGTCAGCATGTGCTGTGAATGGTAACCAACTGATAGTAAGTTACTTGAGTGATGTGAAGCATCTTCTACAAGTAAGAGATTTAAAAACAGGTTCCTTGCTGCATCAACTGCCAATTGACATTGGCACAGTTTATGAGATTTCTGCACGGCGCGAAGATAATGTGGTTTTCATTAGCTTTACAAGCTTTCTAACTCCTGGTATCGTCTATCAGTGCAACCTGGGAACAGGGGTTCCTGATCTGAAGATACTGCGTGAAATTGCGGTCCCTGGGTTTGATCGCTCTGAATTTCATGTCAATCAGGTTTTTGTCCCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAAAAGGGATATTGTTTTGGATGGTTCGCACCCGTGCCTTTTATATGGATATGGTGGTTTTAACATCAGTATTACACCGTCCTTCAGTGTTAGTCGCATTGTACTCACAAAACATTTAGGTGTTGTGTACTGCATTGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAATGCAGGTTCCCTTGCAAGAAAACAGAATTGCTTTGATGACTTCATATCTGCAGCCGAATACCTTATATCTACTGGTTATACCCAACCCCGAAAGTTATGCATTGAAGGTGGAAGCAACGGCGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGATCTCTTTGGCTGCGCATTGGCTCATGTTGGCGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCTTGGACCTCAGATTATGGTTGTGCAGACAAGGAGAAAGAGTTTCATTGGCTAATCAAGTACTCACCATTACATAATGTCCGGAGACCGTGGGAACAGCATCCTGACCAGTCAATTCAATACCCATCCACCATGTTGTTGACGGCAGATCATGATGATCGAGTTGTGCCGCTACACTCATTGAAGCTATTAGCGACCATGCAGTATGTACTATGTAATAGTTTGGAGAAAAGTCCCCAGACAAACCCTATAATTGGCCGCATCGACTGCAAGGCCGGACATGGAGCGGGTCGTCCAACACAGAAAATGATCGATGAAGCTGCTGATCGGTACAGTTTTATGGCTAAAATGTTAGAAGTGCATTGGATTGAATAG 2187 0.4248 MATLNEPLQYPSTRRDDSIVDHYHGVKISDPYRWLEDPDAEEVKEFVEKQVQLTNSVIKKCETRPKLNETITKLFDHPRYDAPFKRADKYFYFHNTGLQPQNILYVQDSLEGEPEVLLDLNALSEDGTVALSTYSVSEDAKYLAYALSSSGSDWVTIKVMHIKDQNVEPDTLSWVKFSSISWTHDSKGFFYSRYPAPKEGEVVDAGTETNSNLYHELYYHFLGTDQSEDILCWKDLANPKYTVGGVVTDDGKYLLLYIGEGCDPVNKLYYYDMYDQPSVLENFRSENSPLPFVKLIDNFDAKYDYIANDDTVFTFLTNKDAPKYKLVRVDLKKPNAWADVLRESEKDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLLHQLPIDIGTVYEISARREDNVVFISFTSFLTPGIVYQCNLGTGVPDLKILREIAVPGFDRSEFHVNQVFVPSKDGTKIPMFIVAKRDIVLDGSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGVVYCIANIRGGGEYGEEWHNAGSLARKQNCFDDFISAAEYLISTGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCADKEKEFHWLIKYSPLHNVRRPWEQHPDQSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLCNSLEKSPQTNPIIGRIDCKAGHGAGRPTQKMIDEAADRYSFMAKMLEVHWIE 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03303 728 Gene3D alpha/beta hydrolase 19 718 IPR029058 -
Car05g03303 728 SUPERFAMILY alpha/beta-Hydrolases 448 672 IPR029058 -
Car05g03303 728 Pfam Prolyl oligopeptidase family 493 723 IPR001375 GO:0006508|GO:0008236
Car05g03303 728 PANTHER PROLYL ENDOPEPTIDASE 2 728 - -
Car05g03303 728 Gene3D - 78 437 - -
Car05g03303 728 SUPERFAMILY Peptidase/esterase 'gauge' domain 7 440 - -
Car05g03303 728 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 11 426 IPR023302 GO:0004252
Car05g03303 728 ProSitePatterns Prolyl endopeptidase family serine active site. 540 570 IPR002471 GO:0004252|GO:0006508
Car05g03303 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 478 496 IPR002470 GO:0004252|GO:0006508
Car05g03303 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 505 529 IPR002470 GO:0004252|GO:0006508
Car05g03303 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 533 552 IPR002470 GO:0004252|GO:0006508
Car05g03303 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 563 583 IPR002470 GO:0004252|GO:0006508
Car05g03303 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 645 667 IPR002470 GO:0004252|GO:0006508
Car05g03303 728 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 2 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03303 Car-Chr5 77743759 77749709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03303 478 672 Carbohydrate Esterase AT5G36210 26.500 3.69e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03303 K01322 - gmx:100776544 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03303 05 77743759 77749709 Car05g03303 05 77743759 77749709 ECH
Car04g03618 04 65634397 65637701 Car05g03303 05 77743759 77749709 PCT