Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03298 ATGACTCATAAATCAGACCCCACCGTCATTTACCTTCACGGTAACCTCCATTTAAAAATCGTTGAAGCTCGTTTTCTACCTAACATGGACATGTTCTCCGAGCGTTTTCGAAGATTCTTCTCCGCTATTAACGCATGCAGTGCTTCTATAGGTGGTAAAGGTAAAAACCATCCGCCACGTCATCATCACCATAAGATAATCACAAGCGATCCATACGTCACCGTTTGTCTCGCCGGTGCCACGGTGGCACGCACGCGCGTTATTTCCAATTCGCAATCACCTAAATGGGAAGAACATTTCAAAATCCCTCTCGCTCATCCTGTTTCACAAGTTGAATTCTACGTGAAAGATAATGACATGTTCGGTGCCGATTTAATCGGAATCGCAACCGTTTCTGCTAAGAGAATCTTATCAGGTGAAGATATAAGCGATTGGTTTCCGAttataggtccgtgcggtaaaactccaaaacctgattgcgccgttcgtcttgAAATGAAATTCACGAGATGTGATGATAGTCCTCTGTTTCGCTCCGGTTTGGCGCCCGAACCTGATCGGTTCGTGGTTCGGGATTCGTATTTTCCGGTTCGGCGTGGAGGAGCGGTGACGCTGTATCAAGACGCCCATGTTCCGGATTCAATGTTGCCGGGGATTAAATTGGATGATGGCGTTGAGTTTCAACATGGGAAGTGTTGGGAAGATATTTGTCATGCGATATTGGAAGCGCATCATATGGTATATATTGTTGGTTGGTCAATCTACCATAAGGTGAAGCTTGTTAGAGAACCAACCAAACCCTTACCTAGTGGTGGAAATTTGAATTTGGGAGAATTACTCAAGTACAAATCACAAGAAGGTTTGAGAGTTTTAATGTTGGTTTGGGATGATAAAACTTCGCACAACAAATTTTTCTTTAAGACGAATGGAATAATGCAAACTCATGATGAAGAAACTCGAAAGTTTTTCAAACATTCTTCAGTCACATGTGTGTTGTCGCCTCGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGTTGTTGGAACGCTTTTTACACACCATCAGAAATGTGTGATCGTTGATACTCAAGCACATGGCAACCATCGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACACCCGAGCATAGAATTTTCCATGATCTTGACACTGTTTATAAGGATGATTATCATAATCCCACATTTCCTGCTGGAACCAAGGGTCCAAGGCAACCATGGCACGATTTACATTGCAAAATTGAAGGGCCCGCTGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAGGAGAGCCACCAAATGGTCTGATTTAGGTCAAAAATTCAAAAGAGTGTCTCACTGGGTTGATGATTCTTTGATTAAGTTAGACCGCATCTCTTGGATTCTCAGTCCTTCTGAATCACTTCCAAATGATGATCCTGAATTATGGGTTTCAAAGGAAGATGACCCTGAAAATTGGCACGTTCAGGTTTTTCGATCCATTGATTCGGGCTCTTTGAAAGGATTTCCTAAGGATGTGCATGAAGCCGAGGCTCAGAATCTTATTTGTGCTAAAAATCTGGTCATAGACAAGAGTATTCAAACAGCATACATACACGCTATCAGATCTGCTCAGCATTTTATATATATCGAGAATCAATACTTCATTGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCTGATAACTTAATTCCTATCGAGTTAGCACTGAAGATTGTCAGTAAGATCCGAGCCAATGAGAGATTTACAGTTTACATTGTCATTCCAATGTGGCCTGAAGGTGTCCCTTCTTCTGCCGCTGTGCAAGAGATTCTCTATTTTCAGGGACAAACTATGGAAATGATGTATGAAATCATAGCTCGGGAGTTAAAGCTTCATAACATTGAAAATAGGAATCCACAAGATTACCTCAACTTTTACTGTCTCGGTAACCGAGAGAAGTTTGCAACTGAAGTTTCAACTACAAATAATTCACATTCGGATAATGGTGACACGGTCTCAGCTTCACAAAAGTTCCAACGATTTATGATTTATGTACATGCCAAGGGAATGGTTGTGGATGATGAATATGTGATGGTTGGGTCTGCCAATATCAACCAACGATCTTTGGCTGGATCAAGGGATACTGAGATAGCAATGGGTGCTTATCAACCCCGTCATACATGGAGTAAGAAAAAGGGATATCCACACGGCCAGGTATATGGATATAGAATGTCCTTGTGGGCAGAGCACTTAGGAACCATACACGATTGCTTCAACGAGCCTGAAAGTTTGGAATGCCTGAAGAGCGTGAACAAGATCGCCGAAGACAACTGGAAGAAGTTTACATCTGATGATTTTACTTCATTGCAAGGGCACCTTTTGAAATATCCCATCAAAGTGAATGCAAATGGGAAAGTAAGCTCTTTACCTGGATTTGAATCTTTCCCAGATGTCGGAGGCAAGGTGCTTGGTTCACGTTCTACTCTTCCTGATGCTCTAACTACATAG 2550 0.4122 MTHKSDPTVIYLHGNLHLKIVEARFLPNMDMFSERFRRFFSAINACSASIGGKGKNHPPRHHHHKIITSDPYVTVCLAGATVARTRVISNSQSPKWEEHFKIPLAHPVSQVEFYVKDNDMFGADLIGIATVSAKRILSGEDISDWFPIIGPCGKTPKPDCAVRLEMKFTRCDDSPLFRSGLAPEPDRFVVRDSYFPVRRGGAVTLYQDAHVPDSMLPGIKLDDGVEFQHGKCWEDICHAILEAHHMVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGELLKYKSQEGLRVLMLVWDDKTSHNKFFFKTNGIMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQAHGNHRKITAFIGGLDLCDGRYDTPEHRIFHDLDTVYKDDYHNPTFPAGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRRATKWSDLGQKFKRVSHWVDDSLIKLDRISWILSPSESLPNDDPELWVSKEDDPENWHVQVFRSIDSGSLKGFPKDVHEAEAQNLICAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPIELALKIVSKIRANERFTVYIVIPMWPEGVPSSAAVQEILYFQGQTMEMMYEIIARELKLHNIENRNPQDYLNFYCLGNREKFATEVSTTNNSHSDNGDTVSASQKFQRFMIYVHAKGMVVDDEYVMVGSANINQRSLAGSRDTEIAMGAYQPRHTWSKKKGYPHGQVYGYRMSLWAEHLGTIHDCFNEPESLECLKSVNKIAEDNWKKFTSDDFTSLQGHLLKYPIKVNANGKVSSLPGFESFPDVGGKVLGSRSTLPDALTT 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03298 849 Pfam C2 domain 14 148 IPR000008 -
Car05g03298 849 SUPERFAMILY Phospholipase D/nuclease 540 780 - -
Car05g03298 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 386 IPR001736 GO:0003824
Car05g03298 849 PANTHER PHOSPHOLIPASE D 6 848 IPR015679 -
Car05g03298 849 Pfam PLD-like domain 548 731 IPR025202 -
Car05g03298 849 PANTHER PHOSPHOLIPASE D 6 848 - -
Car05g03298 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 168 IPR035892 -
Car05g03298 849 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Car05g03298 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Car05g03298 849 Pfam Phospholipase D C terminal 770 839 IPR024632 -
Car05g03298 849 Gene3D Endonuclease Chain A 225 466 - -
Car05g03298 849 CDD C2_plant_PLD 9 169 - -
Car05g03298 849 SMART pld_4 695 722 IPR001736 GO:0003824
Car05g03298 849 SMART pld_4 351 386 IPR001736 GO:0003824
Car05g03298 849 Pfam Phospholipase D Active site motif 352 386 IPR001736 GO:0003824
Car05g03298 849 SUPERFAMILY Phospholipase D/nuclease 192 457 - -
Car05g03298 849 Gene3D Endonuclease Chain A 517 748 - -
Car05g03298 849 SMART C2_3c 15 145 IPR000008 -
Car05g03298 849 PIRSF PLD_plant 1 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car05g03298 849 Gene3D C2 domain 12 175 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03298 Car-Chr5 77686558 77693814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03298 1 678 Phospholipase D Gene Family (Wang group) AT4G35790 66.092 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03298 K01115 - gmx:100795859 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03298 05 77686558 77693814 Car05g03298 05 77686558 77693814 ECH